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SCNpilot_cont_750_bf_scaffold_1523

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1523_1
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..686)
DNA (684bp) protein (228aa)
Dipeptide-binding protein ABC transporter, periplasmic substrate-binding protein component n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9Q3E5_9RHOB
Dipeptide-binding protein ABC transporter, periplasmic substrate-binding protein component {ECO:0000313|EMBL:EPX75861.1}; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" source="Salipiger mucosus DSM 16094.;"
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_1523_2
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1124..1510
DNA (387bp) protein (129aa)
Riorf32 protein n=1 Tax=Agrobacterium rhizogenes RepID=Q9F5G0_AGRRH
Riorf32 protein {ECO:0000313|EMBL:BAB16151.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1523_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1533..2600
DNA (1068bp) protein (356aa)
opine dehydrogenase (EC:1.5.1.28)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E29BAF rbh
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:KFC63447.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_750_bf_scaffold_1523_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2657..3499)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI000370BC2E
Alpha/beta hydrolase fold-3 domain protein {ECO:0000313|EMBL:KFC69254.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
esterase
SCNpilot_cont_750_bf_scaffold_1523_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3634..4035
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCF1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37275.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative transmembrane protein
SCNpilot_cont_750_bf_scaffold_1523_6
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4054..5085)
DNA (1032bp) protein (344aa)
type 11 methyltransferase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] rbh
Methyltransferase type 11 n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VFW1_SPHWW rbh
Methyltransferase type 11 {ECO:0000313|EMBL:ABQ71177.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_750_bf_scaffold_1523_7
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5082..5885)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036FF052
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ38824.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_750_bf_scaffold_1523_8
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5882..6505)
DNA (624bp) protein (208aa)
Anti-sigma factor, putative, ChrR family n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CTF0_9BRAD
Anti-sigma factor, putative, ChrR family {ECO:0000313|EMBL:EJN12334.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
anti-ECFsigma factor ChrR; K07167 putative transcriptional regulator
SCNpilot_cont_750_bf_scaffold_1523_9
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6502..7122)
DNA (621bp) protein (207aa)
RNA polymerase sigma factor n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFT2_XANP2
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_750_bf_scaffold_1523_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7193..7567)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NUK3_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS29903.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1523_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7600..8199)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D479_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR77961.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1523_12
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8351..9691
DNA (1341bp) protein (447aa)
NADH-ubiquinone oxidoreductase subunit 6 n=1 Tax=Variovorax paradoxus RepID=UPI00036413C3
NADH-ubiquinone oxidoreductase subunit 6 {ECO:0000313|EMBL:KJC59994.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
putative amine oxidase
SCNpilot_cont_750_bf_scaffold_1523_13
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9688..10491
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B56BCE
hypothetical protein; K09701 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF88435.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_750_bf_scaffold_1523_14
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10488..11720
DNA (1233bp) protein (411aa)
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79); K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] rbh
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:ADX47385.1}; EC=2.1.1.79 {ECO:0000313|EMBL:ADX47385.1};; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Acidovorax avenae RepID=UPI00030C74CB rbh
SCNpilot_cont_750_bf_scaffold_1523_15
unknown

Not on your lists

comp(11654..11875)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1523_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12418..13173
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00035C4439 rbh
HmuT protein {ECO:0000313|EMBL:KFC72819.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter periplasmic protein; K02016 iron complex transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_1523_17
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13170..13445
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00036DC0F3
ABC transporter permease {ECO:0000313|EMBL:EWY36943.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
ABC transporter permease; K02015 iron complex transport system permease protein
Displaying 17 items

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