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SCNpilot_cont_750_bf_scaffold_1575

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1575_1
unknown

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47..427
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1575_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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531..884
DNA (354bp) protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC72799.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_750_bf_scaffold_1575_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1011..1514)
DNA (504bp) protein (168aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Holliday junction resolvase-like protein; K07447 putative holliday junction resolvase [EC:3.1.-.-]
Putative Holliday junction resolvase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWX3_9RHIZ
SCNpilot_cont_750_bf_scaffold_1575_4
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1676..2194
DNA (519bp) protein (173aa)
UPI0003CE867B related cluster n=1 Tax=unknown RepID=UPI0003CE867B
Acetyltransferase {ECO:0000313|EMBL:ESX62844.1}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1575_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2191..3123
DNA (933bp) protein (311aa)
D-3-phosphoglycerate dehydrogenase SerA {ECO:0000313|EMBL:KFC72806.1}; EC=1.1.1.95 {ECO:0000313|EMBL:KFC72806.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
serA1; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
D-3-phosphoglycerate dehydrogenase SerA n=3 Tax=Oligotropha carboxidovorans RepID=F8BK12_OLICM
SCNpilot_cont_750_bf_scaffold_1575_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4038..5777)
DNA (1740bp) protein (580aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
adenine deaminase (EC:3.5.4.2); K01486 adenine deaminase [EC:3.5.4.2] rbh
adenine deaminase n=1 Tax=Xanthobacteraceae RepID=UPI000365BE1B rbh
SCNpilot_cont_750_bf_scaffold_1575_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5876..6574
DNA (699bp) protein (233aa)
UPF0173 metal-dependent hydrolase Mnod_3315 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=Y3315_METNO rbh
UPF0173 metal-dependent hydrolase FG93_06202 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
beta-lactamase domain-containing protein rbh
SCNpilot_cont_750_bf_scaffold_1575_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6755..7042
DNA (288bp) protein (96aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZD8_9BRAD
SCNpilot_cont_750_bf_scaffold_1575_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7125..8639
DNA (1515bp) protein (505aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWY0_9RHIZ rbh
SCNpilot_cont_750_bf_scaffold_1575_10
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8871..9299
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZM7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM29419.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1575_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9292..10524
DNA (1233bp) protein (411aa)
hemolysin D n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D27889 rbh
Multidrug resistance efflux pump {ECO:0000313|EMBL:KFC75000.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
multidrug resistance efflux pump rbh
SCNpilot_cont_750_bf_scaffold_1575_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10645..12669)
DNA (2025bp) protein (675aa)
transporter n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036E7E96
Hydrophobe/amphiphile efflux-1 HAE1 {ECO:0000313|EMBL:KFC61614.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
Displaying 12 items

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