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SCNpilot_cont_750_bf_scaffold_1689

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1689_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..865
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003652AED rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:KFC63613.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transcriptional regulator protein
SCNpilot_cont_750_bf_scaffold_1689_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

934..1809
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EBB30F rbh
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:KFC63614.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein
SCNpilot_cont_750_bf_scaffold_1689_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1799..2632
DNA (834bp) protein (278aa)
ABC-type sugar transport system, permease component n=1 Tax=Rhizobium sp. CF080 RepID=J2TJM1_9RHIZ rbh
ABC transporter permease protein {ECO:0000313|EMBL:KFC63615.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein
SCNpilot_cont_750_bf_scaffold_1689_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2658..3872
DNA (1215bp) protein (405aa)
transcriptional antiterminator n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FFBA55 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFC63616.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
sugar ABC transporter substrate-binding protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_750_bf_scaffold_1689_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3947..5386
DNA (1440bp) protein (480aa)
FAD binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003049FBC rbh
Fumarate reductase/succinate dehydrogenase flavoprotein domain protein {ECO:0000313|EMBL:KFC63617.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein rbh
SCNpilot_cont_750_bf_scaffold_1689_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5388..7043
DNA (1656bp) protein (552aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003005692 rbh
FGGY-family pentulose kinase {ECO:0000313|EMBL:KFC63618.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
FGGY-family pentulose kinase
SCNpilot_cont_750_bf_scaffold_1689_7
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7040..7768
DNA (729bp) protein (243aa)
ribitol 2-dehydrogenase protein (EC:1.1.1.56); K00039 ribitol 2-dehydrogenase [EC:1.1.1.56]
UPI0003CEDD96 related cluster n=1 Tax=unknown RepID=UPI0003CEDD96
Ribitol 2-dehydrogenase {ECO:0000313|EMBL:KFC63619.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_750_bf_scaffold_1689_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7922..8743
DNA (822bp) protein (274aa)
Metallophosphoesterase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WWL5_OCHA4 rbh
Putative Metallophosphoesterase {ECO:0000313|EMBL:KFC76020.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
metallophosphoesterase rbh
SCNpilot_cont_750_bf_scaffold_1689_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8825..10012
DNA (1188bp) protein (396aa)
ABC transporter related n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WWL4_OCHA4 rbh
Fused maltose transport subunit, ATP-binding component of ABC superfamily regulatory protein {ECO:0000313|EMBL:KFC76021.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter-like protein; K02023 multiple sugar transport system ATP-binding protein rbh
SCNpilot_cont_750_bf_scaffold_1689_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10015..10938
DNA (924bp) protein (308aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WWL3_OCHA4 rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:KFC76022.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
binding-protein-dependent transport system inner membrane protein; K02025 multiple sugar transport system permease protein rbh
SCNpilot_cont_750_bf_scaffold_1689_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10938..11813
DNA (876bp) protein (292aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WWL2_OCHA4 rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:KFC76023.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein rbh
SCNpilot_cont_750_bf_scaffold_1689_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11900..14017
DNA (2118bp) protein (706aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003668FE1 rbh
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:KFC76024.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative sugar ABC transporter, substrate-binding component
SCNpilot_cont_750_bf_scaffold_1689_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14205..14690
DNA (486bp) protein (162aa)
Inositol-1-monophosphatase (IMPase) {ECO:0000313|EMBL:KFC76026.1}; EC=3.1.3.25 {ECO:0000313|EMBL:KFC76026.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
Inositol monophosphatase n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QZJ9_ISOPI
SCNpilot_cont_750_bf_scaffold_1689_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14700..15656)
DNA (957bp) protein (319aa)
Transcriptional regulator with sigma factor-related N-terminal domain n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXW5_9RHIZ rbh
Putative transcriptional regulator {ECO:0000313|EMBL:KFC76030.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative transcriptional regulator, DeoR family rbh
SCNpilot_cont_750_bf_scaffold_1689_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15857..16897
DNA (1041bp) protein (347aa)
NAD-binding, L-idonate 5-dehydrogenase {ECO:0000313|EMBL:KFC76031.1}; EC=1.1.1.264 {ECO:0000313|EMBL:KFC76031.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EDCE60 rbh
gutB; hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_1689_16
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17494..18738
DNA (1245bp) protein (415aa)
L-serine dehydratase 1; K01752 L-serine dehydratase [EC:4.3.1.17] rbh
serine ammonia-lyase n=1 Tax=Sphingobium xenophagum RepID=UPI000370929F rbh
L-serine dehydratase 1 {ECO:0000313|EMBL:BAF89874.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_750_bf_scaffold_1689_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18817..19872
DNA (1056bp) protein (352aa)
Low-specificity L-threonine aldolase {ECO:0000313|EMBL:KFC69305.1}; EC=4.1.2.5 {ECO:0000313|EMBL:KFC69305.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
L-threonine aldolase (EC:4.1.2.5); K01620 threonine aldolase [EC:4.1.2.5] rbh
Low-specificity L-threonine aldolase n=1 Tax=Rhodobacter sp. AKP1 RepID=L1KDZ5_9RHOB rbh
SCNpilot_cont_750_bf_scaffold_1689_18
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19942..20964)
DNA (1023bp) protein (341aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXJ1_9RHIZ rbh
Transcriptional regulator {ECO:0000313|EMBL:EIM28683.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
LacI family transcriptional regulator rbh
SCNpilot_cont_750_bf_scaffold_1689_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21125..22411
DNA (1287bp) protein (429aa)
Putative sugar ABC transporter, periplasmic binding protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YW63_BRASO rbh
Putative sugar ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:KFC70485.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
sugar ABC transporter substrate-binding protein; K02027 multiple sugar transport system substrate-binding protein rbh
SCNpilot_cont_750_bf_scaffold_1689_20
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22417..23439
DNA (1023bp) protein (341aa)
Putative sugar ABC transporter, permease protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YW62_BRASO rbh
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein rbh
Putative sugar ABC transporter, permease protein {ECO:0000313|EMBL:CAL78138.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
SCNpilot_cont_750_bf_scaffold_1689_21
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23436..24488
DNA (1053bp) protein (351aa)
ABC-type sugar transport system, permease component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXI8_9RHIZ rbh
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:EIM28680.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein rbh
SCNpilot_cont_750_bf_scaffold_1689_22
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24488..25555
DNA (1068bp) protein (356aa)
ATPase component of ABC-type sugar transporter n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXI7_9RHIZ rbh
ATPase component of ABC-type sugar transporter {ECO:0000313|EMBL:EIM28679.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
sugar ABC transporter ATP-binding protein; K02023 multiple sugar transport system ATP-binding protein rbh
SCNpilot_cont_750_bf_scaffold_1689_23
unknown

Not on your lists

comp(25801..26172)
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1689_24
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26497..27786
DNA (1290bp) protein (430aa)
alpha-glucosidase (EC:3.2.1.20); K01187 alpha-glucosidase [EC:3.2.1.20]
Family 31 glycosyl hydrolase, alpha-glucosidase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXI6_9RHIZ rbh
Family 31 glycosyl hydrolase, alpha-glucosidase {ECO:0000313|EMBL:EIM28678.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
SCNpilot_cont_750_bf_scaffold_1689_25
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27902..28600
DNA (699bp) protein (233aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhizobium sp. Pop5 RepID=K0W4M0_9RHIZ rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EJZ18634.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_750_bf_scaffold_1689_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28622..29068)
DNA (447bp) protein (149aa)
fucU; fucose operon FucU protein; K02431 L-fucose mutarotase [EC:5.1.3.-]
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00032000E9
Fucose dissimilation pathway protein FucU {ECO:0000313|EMBL:KFC66546.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_750_bf_scaffold_1689_27
bacterium YEK0313, Bacteria

Not on your lists

comp(29062..30090)
DNA (1029bp) protein (343aa)
pyridoxal 4-dehydrogenase (EC:1.1.1.107)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DBF6D7 rbh
Pyridoxal 4-dehydrogenase {ECO:0000313|EMBL:CEJ15275.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_750_bf_scaffold_1689_28
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30220..31569
DNA (1350bp) protein (450aa)
Putative amidase n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4TS50_BORBO rbh
Putative amidase {ECO:0000313|EMBL:CCN22955.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
amidase rbh
SCNpilot_cont_750_bf_scaffold_1689_29
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31657..32991)
DNA (1335bp) protein (445aa)
C4-dicarboxylate transport protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVE1_9PROT rbh
C4-dicarboxylate transport protein {ECO:0000256|HAMAP-Rule:MF_01300}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
C4-dicarboxylate transporter DctA; K11103 aerobic C4-dicarboxylate transport protein
SCNpilot_cont_750_bf_scaffold_1689_30
unknown

Not on your lists

comp(33418..34194)
DNA (777bp) protein (259aa)

This feature has no annotations

Displaying items 1-30 of 39 in total

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