ggKbase home page

SCNpilot_cont_750_bf_scaffold_2122

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_2122_1
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..302
DNA (300bp) protein (100aa)
transporter n=1 Tax=Methylobacterium sp. 88A RepID=UPI00036685F0
Transporter {ECO:0000313|EMBL:KJR61797.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
conserved hypothetical protein; putative inner membrane transport protein
SCNpilot_cont_750_bf_scaffold_2122_2
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

437..1378
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F97659 rbh
ABC transporter permease {ECO:0000313|EMBL:KGD96610.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_750_bf_scaffold_2122_3
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1378..2259
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030A5597 rbh
Peptide ABC transporter permease {ECO:0000313|EMBL:KGD96609.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
appC; ABC transporter permease rbh
SCNpilot_cont_750_bf_scaffold_2122_4
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2262..3026
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000302AD78
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL52761.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_750_bf_scaffold_2122_5
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3099..4598
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003067B54 rbh
Oligopeptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGD96608.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
accA; oligopeptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein rbh
SCNpilot_cont_750_bf_scaffold_2122_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4673..6139)
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002ED882D rbh
Putative phosphonoacetate hydrolase {ECO:0000313|EMBL:KFC70490.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
type I phosphodiesterase/nucleotide pyrophosphatase
SCNpilot_cont_750_bf_scaffold_2122_7
bacterium YEK0313, Bacteria

Not on your lists

comp(6167..7150)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D2C694 rbh
Oligopeptide transport ATP-binding protein OppF {ECO:0000313|EMBL:CEJ15308.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_cont_750_bf_scaffold_2122_8
bacterium YEK0313, Bacteria

Not on your lists

comp(7147..8217)
DNA (1071bp) protein (357aa)
ABC transporter n=1 Tax=Roseomonas sp. B5 RepID=UPI0003115E9C
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:CEJ15307.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_2122_9
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8443..9855)
DNA (1413bp) protein (471aa)
Amidohydrolase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A329_9PROT rbh
Amidohydrolase {ECO:0000313|EMBL:EHL99459.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
amidohydrolase; K12941 aminobenzoyl-glutamate utilization protein B
SCNpilot_cont_750_bf_scaffold_2122_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10286..11224)
DNA (939bp) protein (313aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:KFC75429.1}; EC=1.3.1.12 {ECO:0000313|EMBL:KFC75429.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
prephenate dehydrogenase; K00220 cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12] rbh
cyclohexadienyl dehydrogenase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI0003786960 rbh
SCNpilot_cont_750_bf_scaffold_2122_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11230..12330)
DNA (1101bp) protein (367aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] rbh
Histidinol-phosphate aminotransferase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=HIS8_METNO rbh
SCNpilot_cont_750_bf_scaffold_2122_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12369..12947)
DNA (579bp) protein (193aa)
Chorismate mutase I {ECO:0000313|EMBL:KFC75431.1}; EC=5.4.99.5 {ECO:0000313|EMBL:KFC75431.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Chorismate mutase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMB5_9RHIZ
hypothetical protein
Displaying 12 items

View Taxonomy