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SCNpilot_cont_750_bf_scaffold_2489

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_2489_1
bacterium YEK0313, Bacteria

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2..1108
DNA (1107bp) protein (369aa)
acyl-CoA dehydrogenase domain-containing protein; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3] rbh
acyl-CoA dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037C1797
(R)-benzylsuccinyl-CoA dehydrogenase {ECO:0000313|EMBL:CEJ14065.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_750_bf_scaffold_2489_2
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1105..2043
DNA (939bp) protein (313aa)
Aminoglycoside phosphotransferase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IBP8_XANP2
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ABS65441.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_750_bf_scaffold_2489_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2130..2393)
DNA (264bp) protein (88aa)
Cell division topological specificity factor MinE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRX8_9RHIZ
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
minE; Putative cell division inhibitor
SCNpilot_cont_750_bf_scaffold_2489_4
bacterium YEK0313, Bacteria

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comp(2390..3205)
DNA (816bp) protein (272aa)
Septum site-determining protein MinD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EPE4_9RHIZ rbh
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
septum site-determining protein MinD; K03609 septum site-determining protein MinD
SCNpilot_cont_750_bf_scaffold_2489_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3238..4038)
DNA (801bp) protein (267aa)
Probable septum site-determining protein MinC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C6Q7_9RHIZ rbh
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
minC; septum formation inhibitor; K03610 septum site-determining protein MinC
SCNpilot_cont_750_bf_scaffold_2489_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4238..4990)
DNA (753bp) protein (251aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJ42_NITHX
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABE63755.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_2489_7
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(5534..6562)
DNA (1029bp) protein (343aa)
Glycosyltransferase n=1 Tax=planctomycete KSU-1 RepID=I3INL1_9PLAN
Glycosyltransferase {ECO:0000313|EMBL:GAB63306.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
glycosyl transferase family protein
SCNpilot_cont_750_bf_scaffold_2489_8
Marinobacter adhaerens, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6582..8018)
DNA (1437bp) protein (479aa)
polysaccharide pyruvyl transferase (EC:2.-.-.-)
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:ADP97668.1}; EC=2.-.-.- {ECO:0000313|EMBL:ADP97668.1};; TaxID=225937 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter adhaerens (strain HP15).;"
Polysaccharide pyruvyl transferase n=1 Tax=Marinobacter adhaerens (strain HP15) RepID=E4PPY8_MARAH
SCNpilot_cont_750_bf_scaffold_2489_9
Hyphomonas atlantica, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8015..9355)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037B6BD3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KCZ59226.1}; TaxID=1280948 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas atlantica.;"
protoporphyrinogen oxidase rbh
SCNpilot_cont_750_bf_scaffold_2489_10
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9393..10547)
DNA (1155bp) protein (385aa)
CDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:CDH47279.1}; EC=4.2.1.45 {ECO:0000313|EMBL:CDH47279.1};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
CDP-glucose 4,6-dehydratase; K01709 CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036D2944 rbh
SCNpilot_cont_750_bf_scaffold_2489_11
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10641..11969)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000373118E rbh
Homoserine dehydrogenase NAD-binding protein {ECO:0000313|EMBL:EPR36033.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_2489_12
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(12007..12573)
DNA (567bp) protein (189aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:ABY34443.1}; EC=5.1.3.13 {ECO:0000313|EMBL:ABY34443.1};; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036179C1
SCNpilot_cont_750_bf_scaffold_2489_13
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12695..13204)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000367646A
Lipopolysaccharide biosynthesis protein WzxC {ECO:0000313|EMBL:ESS66173.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
membrane protein
Displaying 13 items

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