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SCNpilot_cont_750_bf_scaffold_4027

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_4027_1
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1224)
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F431FD
glutamate-1-semialdehyde 2,1-aminomutase GSA; Glutamate-1-semialdehyde aminotransferase; GSA-AT
Putative aminotransferase {ECO:0000313|EMBL:CCF00656.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_cont_750_bf_scaffold_4027_2
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1239..2090)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036C6762 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM38753.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_750_bf_scaffold_4027_3
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2413..3081
DNA (669bp) protein (223aa)
dehalogenase; K01560 2-haloacid dehalogenase [EC:3.8.1.2]
dehalogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D4CDA3 rbh
2-haloacid dehalogenase protein {ECO:0000313|EMBL:ENN88451.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_cont_750_bf_scaffold_4027_4
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3093..4370
DNA (1278bp) protein (426aa)
FAD-dependent oxidoreductase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D9BCF4 rbh
Glycine/D-amino acid oxidase, deaminating {ECO:0000313|EMBL:EJC63685.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
putative oxidoreductase rbh
SCNpilot_cont_750_bf_scaffold_4027_5
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4228..6819)
DNA (2592bp) protein (864aa)
succinate-semialdehyde dehydrogenase (NADP+) protein (EC:1.2.1.79) rbh
Succinate-semialdehyde dehydrogenase (NADP+) protein {ECO:0000313|EMBL:AGS26238.1}; EC=1.2.1.79 {ECO:0000313|EMBL:AGS26238.1};; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
succinate-semialdehyde dehdyrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E771E6 rbh
SCNpilot_cont_750_bf_scaffold_4027_6
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6831..8294)
DNA (1464bp) protein (488aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] rbh
aldehyde dehydrogenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000374CC2B rbh
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ACL57859.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_750_bf_scaffold_4027_7
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8428..8658)
DNA (231bp) protein (77aa)
cupin n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DEF10E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL48844.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_750_bf_scaffold_4027_8
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8818..9741)
DNA (924bp) protein (308aa)
Bifunctional glyoxylate/hydroxypyruvate reductase A 2 {ECO:0000313|EMBL:AJC82897.1}; EC=1.1.1.79 {ECO:0000313|EMBL:AJC82897.1};; EC=1.1.1.81 {ECO:0000313|EMBL:AJC82897.1};; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
putative D-2-hydroxyacid dehydrogenase; K12972 gyoxylate/hydroxypyruvate reductase A [EC:1.1.1.79 1.1.1.81] rbh
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DD8936 rbh
SCNpilot_cont_750_bf_scaffold_4027_9
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9766..10092)
DNA (327bp) protein (109aa)
Acetylornithine deacetylase {ECO:0000256|SAAS:SAAS00063950}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279026};; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00279018};; EC=3.5.1.16 {ECO:0000256|SAAS:SAAS00063953};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
argE; acetylornithine deacetylase; K01438 acetylornithine deacetylase [EC:3.5.1.16]
acetylornithine deacetylase n=1 Tax=Rhizobium leguminosarum RepID=UPI00037DE39D
SCNpilot_cont_750_bf_scaffold_4027_10
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10173..10847)
DNA (675bp) protein (225aa)
Acetylornithine deacetylase {ECO:0000256|SAAS:SAAS00063950}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279026};; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00279018};; EC=3.5.1.16 {ECO:0000256|SAAS:SAAS00063953};; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
argE; acetylornithine deacetylase ArgE (EC:3.5.1.16)
acetylornithine deacetylase n=1 Tax=Rhizobium meliloti RepID=UPI00037F9E7D
SCNpilot_cont_750_bf_scaffold_4027_11
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11051..11956
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D9F2BD rbh
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:BAF88037.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_750_bf_scaffold_4027_12
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12067..12954
DNA (888bp) protein (296aa)
Phenazine biosynthesis protein PhzF family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YRH7_9RHIZ rbh
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:EIM26569.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
phenazine antibiotic biosynthesis related protein; K06998
SCNpilot_cont_750_bf_scaffold_4027_13
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12951..13310)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M903_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF17515.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_4027_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13315..14382)
DNA (1068bp) protein (356aa)
malate/L-lactate dehydrogenase; K13574 uncharacterized oxidoreductase [EC:1.1.1.-]
dehydrogenase n=1 Tax=Burkholderia bryophila RepID=UPI00036EE0FA
Malate/lactate dehydrogenase {ECO:0000313|EMBL:KFC68915.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_750_bf_scaffold_4027_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14588..14974
DNA (387bp) protein (129aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZU6_9RHIZ
Iron-sulfur cluster assembly protein {ECO:0000313|EMBL:KFC68914.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
HesB protein; K13628 iron-sulfur cluster assembly protein
SCNpilot_cont_750_bf_scaffold_4027_16
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14981..15337
DNA (357bp) protein (119aa)
Regulator of competence-specific genes n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZU7_9RHIZ
Regulator of competence-specific genes {ECO:0000313|EMBL:EIM29489.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
TfoX domain-containing protein
SCNpilot_cont_750_bf_scaffold_4027_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15297..16331)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00036EF766
Diguanylate cyclase {ECO:0000313|EMBL:KFC68913.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
diguanylate cyclase; K13590 diguanylate cyclase
SCNpilot_cont_750_bf_scaffold_4027_18
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16456..17307)
DNA (852bp) protein (284aa)
Putative ATP-dependent RNA helicase {ECO:0000313|EMBL:KFC68912.1}; EC=3.6.1.- {ECO:0000313|EMBL:KFC68912.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
DNA/RNA helicase, superfamily II n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZU8_9RHIZ
helicase
Displaying 18 items

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