ggKbase home page

SCNpilot_cont_750_bf_scaffold_4139

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_4139_1
unknown

Not on your lists

comp(3..65)
DNA (63bp) protein (21aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_4139_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142..1281
DNA (1140bp) protein (380aa)
gltA; citrate synthase 2; K01647 citrate synthase [EC:2.3.3.1] rbh
Citrate synthase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCH7_PHEZH rbh
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_750_bf_scaffold_4139_3
unknown

Not on your lists

1532..1744
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_4139_4
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1871..3538)
DNA (1668bp) protein (556aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
hutUa; urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49]
Urocanate hydratase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HMN8_9RHIZ
SCNpilot_cont_750_bf_scaffold_4139_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3669..5201)
DNA (1533bp) protein (511aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
histidine ammonia-lyase (EC:4.3.1.3); K01745 histidine ammonia-lyase [EC:4.3.1.3]
Histidine ammonia-lyase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z2N3_9RHIZ
SCNpilot_cont_750_bf_scaffold_4139_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5198..6430)
DNA (1233bp) protein (411aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
imidazolonepropionase (EC:3.5.2.7)
imidazolonepropionase n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00035D1888
SCNpilot_cont_750_bf_scaffold_4139_7
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6580..6909)
DNA (330bp) protein (110aa)
Imidazolonepropionase; EC=3.5.2.7;; Imidazolone-5-propionate hydrolase; TaxID=291331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85).;"
Imidazolonepropionase n=3 Tax=Xanthomonas oryzae pv. oryzae RepID=HUTI_XANOR
SCNpilot_cont_750_bf_scaffold_4139_8
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7082..7822
DNA (741bp) protein (247aa)
hutF; N-formimino-L-glutamate deiminase (EC:3.5.3.13)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FF1C9A
Hydrolase {ECO:0000313|EMBL:KFC75388.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_750_bf_scaffold_4139_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7845..8594
DNA (750bp) protein (250aa)
Histidine utilization repressor, transcriptional regulatory protein GntR family n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TVC1_9BRAD
Histidine utilization repressor, transcriptional regulatory protein GntR family {ECO:0000313|EMBL:KFC75387.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transcriptional regulator; K05836 GntR family transcriptional regulator, histidine utilization repressor
SCNpilot_cont_750_bf_scaffold_4139_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8675..8941)
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JBW6_AGRRK
Uncharacterized protein {ECO:0000313|EMBL:KFC75386.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_4139_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9222..9599
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003744C55
Uncharacterized protein {ECO:0000313|EMBL:KFC75385.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
PRC-barrel domain-containing protein
SCNpilot_cont_750_bf_scaffold_4139_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9816..10703
DNA (888bp) protein (296aa)
Transglutaminase domain protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3F8_9RHIZ
Transglutaminase domain protein {ECO:0000313|EMBL:KFC75384.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transglutaminase domain-containing protein
SCNpilot_cont_750_bf_scaffold_4139_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10765..11664
DNA (900bp) protein (300aa)
Putative sphingosine kinase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PJT3_9RHOB
Diacylglycerol kinase catalytic region {ECO:0000313|EMBL:KFC75383.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
sphingosine kinase and enzyme; K07029
SCNpilot_cont_750_bf_scaffold_4139_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11679..12188
DNA (510bp) protein (170aa)
PAP2 superfamily n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IX79_RHOCS
Phosphatidylglycerophosphatase B {ECO:0000313|EMBL:KFC75382.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
PAP2 superfamily
Displaying 14 items

View Taxonomy