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SCNpilot_cont_750_bf_scaffold_4419

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_4419_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..238
DNA (237bp) protein (79aa)
Substrate-binding protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G1E7_9BRAD
Substrate-binding protein {ECO:0000313|EMBL:KFC75990.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
substrate-binding protein
SCNpilot_cont_750_bf_scaffold_4419_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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386..1345
DNA (960bp) protein (320aa)
Oligopeptide transport system permease protein (ABC superfamily, OppBC subfamily) {ECO:0000313|EMBL:KFC66808.1}; EC=3.6.3.24 {ECO:0000313|EMBL:KFC66808.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IM10_METNO rbh
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein rbh
SCNpilot_cont_750_bf_scaffold_4419_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1311..2252
DNA (942bp) protein (314aa)
Putative oligopeptide transport system permease protein oppC (ABC superfamily, membrane) {ECO:0000313|EMBL:KFC66807.1}; EC=3.6.3.24 {ECO:0000313|EMBL:KFC66807.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UB59_METS4 rbh
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein rbh
SCNpilot_cont_750_bf_scaffold_4419_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2374..4224
DNA (1851bp) protein (617aa)
ABC transporter ATP-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q989T5_RHILO rbh
Putative peptide transporter {ECO:0000313|EMBL:KFC66806.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter ATP-binding protein rbh
SCNpilot_cont_750_bf_scaffold_4419_5
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4332..5021)
DNA (690bp) protein (230aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LJM0_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KFG68088.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
ErfK/YbiS/YcfS/YnhG family protein rbh
SCNpilot_cont_750_bf_scaffold_4419_6
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5638..6465
DNA (828bp) protein (276aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
argC; N-acetyl-gamma-glutamyl-phosphate reductase; K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TF11_9BRAD
SCNpilot_cont_750_bf_scaffold_4419_7
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6674..7081
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035ECCD0
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EET87753.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
Carboxymuconolactone decarboxylase
SCNpilot_cont_750_bf_scaffold_4419_8
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7108..9147)
DNA (2040bp) protein (680aa)
NAD+ synthetase n=1 Tax=Methylosinus sp. LW4 RepID=UPI00036995EC rbh
NAD+ synthetase rbh
NAD+ synthetase {ECO:0000313|EMBL:CCJ05912.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_cont_750_bf_scaffold_4419_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9319..10962
DNA (1644bp) protein (548aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQM3_METS4 rbh
Cyclase {ECO:0000313|EMBL:KFC75119.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
glucose-methanol-choline oxidoreductase rbh
SCNpilot_cont_750_bf_scaffold_4419_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11036..11563
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q632_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC75725.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
conserved membrane protein of unknown function
SCNpilot_cont_750_bf_scaffold_4419_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11572..12789)
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00036EE6CB
Tryptophan-rich sensory protein {ECO:0000313|EMBL:KFC75726.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative major facilitator superfamily (MFS) drug efflux transporter
SCNpilot_cont_750_bf_scaffold_4419_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12906..13877)
DNA (972bp) protein (324aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U9J3_METS4 rbh
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein {ECO:0000313|EMBL:KFC62138.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase rbh
SCNpilot_cont_750_bf_scaffold_4419_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13962..14324)
DNA (363bp) protein (121aa)
L-threonine-O-3-phosphate decarboxylase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IS31_METNO
Putative threonine-phosphate decarboxylase {ECO:0000313|EMBL:KFC62139.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
L-threonine-O-3-phosphate decarboxylase; K02225 cobalamin biosynthetic protein CobC
Displaying 13 items

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