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SCNpilot_cont_750_bf_scaffold_1205

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1205_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..327)
DNA (327bp) protein (109aa)
Aspartate aminotransferase A n=1 Tax=Rhodanobacter denitrificans RepID=I4WV97_9GAMM
Aspartate aminotransferase {ECO:0000313|EMBL:EIL99403.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
aspartate/tyrosine/aromatic aminotransferase
SCNpilot_cont_750_bf_scaffold_1205_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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488..742
DNA (255bp) protein (85aa)
Putative membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WV98_9GAMM
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGG88682.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_1205_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(789..1208)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW57_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91448.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1205_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1344..1853)
DNA (510bp) protein (170aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIW4_9GAMM
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
SCNpilot_cont_750_bf_scaffold_1205_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1928..3571)
DNA (1644bp) protein (548aa)
Alpha,alpha-trehalase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WH34_9GAMM rbh
Alpha,alpha-trehalase {ECO:0000313|EMBL:EIL98775.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
neutral trehalase rbh
SCNpilot_cont_750_bf_scaffold_1205_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3568..5862)
DNA (2295bp) protein (765aa)
Trehalose/maltose hydrolase or phosphorylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NB95_9GAMM
trehalose/maltose hydrolase or phosphorylase
Trehalose/maltose hydrolase or phosphorylase {ECO:0000313|EMBL:AGG87859.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_1205_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5991..8516)
DNA (2526bp) protein (842aa)
TonB-denpendent receptor n=1 Tax=Dyella ginsengisoli RepID=UPI0003494078
outer membrane receptor protein
Outer membrane receptor protein {ECO:0000313|EMBL:AGG87861.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_750_bf_scaffold_1205_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8697..10445)
DNA (1749bp) protein (583aa)
Putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIW5_9GAMM rbh
Putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane {ECO:0000313|EMBL:EIL99406.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
3HB-oligomer hydrolase (3HBOH) rbh
SCNpilot_cont_750_bf_scaffold_1205_9
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10653..11312
DNA (660bp) protein (220aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WVA2_9GAMM
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_750_bf_scaffold_1205_10
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11511..13217
DNA (1707bp) protein (569aa)
hypothetical protein rbh
hypothetical protein id=24657759 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber rbh
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SCNpilot_cont_750_bf_scaffold_1205_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13263..14084)
DNA (822bp) protein (274aa)
cysteine synthase (EC:2.5.1.47) rbh
Pyridoxal-5'-phosphate-dependent enzyme subunit beta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWA8_9GAMM rbh
Pyridoxal-5'-phosphate-dependent enzyme subunit beta {ECO:0000313|EMBL:EIL91499.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Displaying 11 items

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