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SCNpilot_cont_750_bf_scaffold_1554

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1554_1
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1080
DNA (1080bp) protein (360aa)
alpha-2-macroglobulin n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD4C9
Alpha-2-macroglobulin domain-containing protein {ECO:0000313|EMBL:EZP51005.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
alpha-2-macroglobulin domain-containing protein
SCNpilot_cont_750_bf_scaffold_1554_2
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1085..3310
DNA (2226bp) protein (742aa)
penicillin-binding protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CD4CA
Penicillin-binding protein 1C {ECO:0000313|EMBL:EZP51006.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
penicillin-binding protein 1C
SCNpilot_cont_750_bf_scaffold_1554_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3582..4379
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036D28EB rbh
Sphingomonas taxi strain 30a NODE_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26390.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1554_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4372..5322)
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WXY8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AIT07320.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1554_5
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5354..6016)
DNA (663bp) protein (221aa)
uroporphyrinogen-III synthase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6677D
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:EZP56159.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
uroporphyrinogen III synthase HEM4
SCNpilot_cont_750_bf_scaffold_1554_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6013..6912)
DNA (900bp) protein (300aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hemC; porphobilinogen deaminase (EC:2.5.1.61) rbh
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000368B615 rbh
SCNpilot_cont_750_bf_scaffold_1554_7
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7120..8145
DNA (1026bp) protein (342aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphapr
protein kinase n=1 Tax=Sphingomonas melonis RepID=UPI000366A6E0
UGMP family protein rbh
SCNpilot_cont_750_bf_scaffold_1554_8
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8142..9113
DNA (972bp) protein (324aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
glycerol-3-phosphate dehydrogenase n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9C0C rbh
SCNpilot_cont_750_bf_scaffold_1554_9
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9381..10748
DNA (1368bp) protein (456aa)
sun; tRNA/rRNA cytosine-C5-methylase (EC:2.1.1.-); K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037156C0
SAM-dependent methlyltransferase {ECO:0000313|EMBL:KHA63391.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
SCNpilot_cont_750_bf_scaffold_1554_10
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10774..10929
DNA (156bp) protein (52aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
ribulose-phosphate 3-epimerase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B51A02
ribulose-5-phosphate 3-epimerase
Displaying 10 items

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