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SCNpilot_cont_750_bf_scaffold_1580

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1580_1
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..466)
DNA (465bp) protein (155aa)
amino acid permease n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036850AB
Amino acid transporter {ECO:0000313|EMBL:KEZ21239.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
amino acid transporter; K03294 basic amino acid/polyamine antiporter, APA family
SCNpilot_cont_750_bf_scaffold_1580_2
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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567..1790
DNA (1224bp) protein (408aa)
dadA; putative D-amino-acid dehydrogenase; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1] rbh
FAD-dependent oxidoreductase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5F9EC rbh
FAD dependent oxidoreductase family protein {ECO:0000313|EMBL:KGB55352.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
SCNpilot_cont_750_bf_scaffold_1580_3
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1922..2935)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CMJ7_SPHYA rbh
Malate/L-lactate dehydrogenase family protein {ECO:0000313|EMBL:KGB55354.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
oxidoreductase rbh
SCNpilot_cont_750_bf_scaffold_1580_4
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3014..4504
DNA (1491bp) protein (497aa)
Amino acid/peptide transporter n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWT4_PSEUP rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL37086.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
amino acid/peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family rbh
SCNpilot_cont_750_bf_scaffold_1580_5
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4467..5501)
DNA (1035bp) protein (345aa)
Putative proline racemase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISZ5_9SPHN rbh
putative proline racemase rbh
Putative proline racemase {ECO:0000313|EMBL:BAK66505.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_cont_750_bf_scaffold_1580_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5643..6557
DNA (915bp) protein (305aa)
dihydrodipicolinate synthase protein (EC:4.3.3.7) rbh
Dihydrodipicolinate synthetase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WSP4_9SPHN rbh
Dihydrodipicolinate synthase {ECO:0000313|EMBL:AIT07077.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_750_bf_scaffold_1580_7
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6564..7562
DNA (999bp) protein (333aa)
4-hydroxyproline epimerase (EC:5.1.1.8); K12658 4-hydroxyproline epimerase [EC:5.1.1.8] rbh
Hydroxyproline-2-epimerase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HG15_9SPHN rbh
Hydroxyproline-2-epimerase {ECO:0000313|EMBL:AIT07076.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_750_bf_scaffold_1580_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7599..8252
DNA (654bp) protein (218aa)
GntR family transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CBC96
GntR family transcriptional regulator {ECO:0000313|EMBL:AIT08214.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
transcriptional regulator, gntr family
SCNpilot_cont_750_bf_scaffold_1580_9
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8371..9573)
DNA (1203bp) protein (401aa)
putative M24B family peptidase; K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] rbh
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CLJ7_SPHYA rbh
Uncharacterized protein {ECO:0000313|EMBL:KGB55353.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
SCNpilot_cont_750_bf_scaffold_1580_10
unknown

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9954..10370
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1580_11
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10599..10745
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GDA2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA98017.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
Displaying 11 items

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