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SCNpilot_cont_750_bf_scaffold_12659

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_12659_1
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..664
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IT14_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB14980.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
TrwC protein
SCNpilot_cont_750_bf_scaffold_12659_2
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

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661..1221
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TL10_RICCO rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EEF23453.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
SCNpilot_cont_750_bf_scaffold_12659_3
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

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1218..1478
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TL11_RICCO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEF23454.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
SCNpilot_cont_750_bf_scaffold_12659_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2422..3336
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U9L0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN89244.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_12659_5
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3539..4318)
DNA (780bp) protein (260aa)
short chain dehydrogenase/reductase family oxidoreductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-ACP reductase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B45C9E
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EWY39546.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
SCNpilot_cont_750_bf_scaffold_12659_6
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4363..4686)
DNA (324bp) protein (108aa)
carotenoid oxygenase n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000382B895
Carotenoid oxygenase {ECO:0000313|EMBL:KCZ98441.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorpha PS728.;"
carotenoid oxygenase; K11159 carotenoid cleavage dioxygenase
SCNpilot_cont_750_bf_scaffold_12659_7
Hyphomonas sp. BRH_c22, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4667..5725)
DNA (1059bp) protein (353aa)
carotenoid oxygenase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002892747
Carotenoid oxygenase {ECO:0000313|EMBL:KJS35388.1}; TaxID=1629710 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. BRH_c22.;"
carotenoid oxygenase; K11159 carotenoid cleavage dioxygenase
SCNpilot_cont_750_bf_scaffold_12659_8
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5825..6382
DNA (558bp) protein (186aa)
TetR family transcriptional regulator n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B3E5F7
TetR family transcriptional regulator {ECO:0000313|EMBL:EGD59242.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
TetR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_12659_9
unknown

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comp(6379..6492)
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying 9 items

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