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SCNpilot_cont_750_bf_scaffold_2639

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_2639_1
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1083)
DNA (1083bp) protein (361aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A (EC:6.3.5.6 6.3.5.7); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
glutamyl-tRNA(Gln) amidotransferase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002887383
SCNpilot_cont_750_bf_scaffold_2639_2
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1142..1429)
DNA (288bp) protein (96aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6 6.3.5.7); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
asparaginyl/glutamyl-tRNA amidotransferase subunit C n=1 Tax=Sphingomonas elodea RepID=UPI0002631D86
SCNpilot_cont_750_bf_scaffold_2639_3
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1525..4026
DNA (2502bp) protein (834aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
pyrB; aspartate carbamoyltransferase catalytic subunit (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] rbh
aspartate carbamoyltransferase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000363FDDC rbh
SCNpilot_cont_750_bf_scaffold_2639_4
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4023..4370
DNA (348bp) protein (116aa)
dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3]
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000382A770
DNA, contig: SP654 {ECO:0000313|EMBL:GAN15251.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_750_bf_scaffold_2639_5
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4370..5152
DNA (783bp) protein (261aa)
pyrC; dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3]
dihydroorotase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002898F91
Dihydroorotase {ECO:0000313|EMBL:GAM02149.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
SCNpilot_cont_750_bf_scaffold_2639_6
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5261..6502)
DNA (1242bp) protein (414aa)
sporulation protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDD88
Sporulation related domain protein {ECO:0000313|EMBL:EZP54814.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
sporulation domain-containing protein
SCNpilot_cont_750_bf_scaffold_2639_7
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6517..6981)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDD87
Uncharacterized protein {ECO:0000313|EMBL:EIM68143.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium indicum B90A.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2639_8
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6981..7697)
DNA (717bp) protein (239aa)
ATPase involved in chromosome partitioning n=1 Tax=Sphingobium sp. AP49 RepID=J2WEB3_9SPHN rbh
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:EJK81178.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
ParA-like protein; K03496 chromosome partitioning protein
SCNpilot_cont_750_bf_scaffold_2639_9
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7935..8915
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000380BA7B
DNA, contig: SP654 {ECO:0000313|EMBL:GAN15256.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
sporulation domain-containing protein
SCNpilot_cont_750_bf_scaffold_2639_10
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9034..9828)
DNA (795bp) protein (265aa)
phosphoserine phosphatase (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3]
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000381A067
SerB protein {ECO:0000313|EMBL:GAN15257.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_750_bf_scaffold_2639_11
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9875..10834
DNA (960bp) protein (320aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
tRNA dimethylallyltransferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] rbh
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003813837 rbh
SCNpilot_cont_750_bf_scaffold_2639_12
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10913..12658
DNA (1746bp) protein (582aa)
acetolactate synthase large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] rbh
acetolactate synthase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B785FC
Acetolactate synthase {ECO:0000313|EMBL:KHA63929.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
SCNpilot_cont_750_bf_scaffold_2639_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12715..13242
DNA (528bp) protein (176aa)
ilvH; acetolactate synthase 3 regulatory subunit (EC:2.2.1.6); K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6]
acetolactate synthase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000381CFBC rbh
Acetolactate synthase {ECO:0000313|EMBL:AIT08116.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_750_bf_scaffold_2639_14
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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13323..13583
DNA (261bp) protein (87aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86]
ketol-acid reductoisomerase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B42664
Displaying 14 items

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