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SCNpilot_cont_750_bf_scaffold_2963

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_2963_1
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..664)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000376447C
Uncharacterized protein {ECO:0000313|EMBL:KHA64430.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2963_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(661..1470)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036D9E2E
Uncharacterized protein {ECO:0000313|EMBL:AIT06491.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_750_bf_scaffold_2963_3
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1539..2216
DNA (678bp) protein (226aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" sou
lipoate-protein ligase B; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181]
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000373B57F
SCNpilot_cont_750_bf_scaffold_2963_4
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2305..2553
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037CF451
Uncharacterized protein {ECO:0000313|EMBL:KHA64432.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
SCNpilot_cont_750_bf_scaffold_2963_5
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2745..3434
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036A8BA3
Sphingomonas taxi strain 30a NODE_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28300.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2963_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3576..4208)
DNA (633bp) protein (211aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
7-cyano-7-deazaguanine reductase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CC5C7 rbh
radical SAM protein rbh
SCNpilot_cont_750_bf_scaffold_2963_7
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4210..4908)
DNA (699bp) protein (233aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3D1DB rbh
queC; queuosine biosynthesis protein QueC; K06920 queuosine biosynthesis protein QueC
SCNpilot_cont_750_bf_scaffold_2963_8
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5088..5450)
DNA (363bp) protein (121aa)
UPI0003CFC0A5 related cluster n=1 Tax=unknown RepID=UPI0003CFC0A5
Uncharacterized protein {ECO:0000313|EMBL:ESZ86819.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_2963_9
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5537..6445)
DNA (909bp) protein (303aa)
molecular chaperone Hsp33 n=1 Tax=Sphingomonas melonis RepID=UPI00036CFB3E
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Hsp33 protein; K04083 molecular chaperone Hsp33
SCNpilot_cont_750_bf_scaffold_2963_10
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6526..7095)
DNA (570bp) protein (190aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
ornithine carbamoyltransferase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC404
argF; ornithine carbamoyltransferase
Displaying 10 items

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