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SCNpilot_cont_750_bf_scaffold_4009

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_4009_1
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..425
DNA (423bp) protein (141aa)
membrane protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002FB3EA7
Membrane protein {ECO:0000313|EMBL:KHA64020.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein; K09125 hypothetical protein
SCNpilot_cont_750_bf_scaffold_4009_2
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(572..1690)
DNA (1119bp) protein (373aa)
Acetyl-CoA acetyltransferase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S1X7_9SPHN
Putative acetyl-CoA acetyltransferase {ECO:0000313|EMBL:GAO39125.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
acetyl-CoA acetyltransferase
SCNpilot_cont_750_bf_scaffold_4009_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2053..2493
DNA (441bp) protein (147aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
peptidase A24A, prepilin type IV; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
peptidase A24 n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289FBC5
SCNpilot_cont_750_bf_scaffold_4009_4
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2490..2957
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003789F34
Uncharacterized protein {ECO:0000313|EMBL:KHA65494.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
SCNpilot_cont_750_bf_scaffold_4009_5
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3043..4452
DNA (1410bp) protein (470aa)
coniferyl aldehyde dehydrogenase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC8AB rbh
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
calB; aldehyde dehydrogenase rbh
SCNpilot_cont_750_bf_scaffold_4009_6
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4498..4656)
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B59E80
Uncharacterized protein {ECO:0000313|EMBL:EZP48961.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_4009_7
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4845..5042
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GV75_SPHAL
Uncharacterized protein {ECO:0000313|EMBL:AJA07996.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_4009_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5094..5594
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B60D34
Sphingomonas taxi strain 30a NODE_40, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30367.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_4009_9
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5717..6679)
DNA (963bp) protein (321aa)
2-nitropropane dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16]
2-nitropropane dioxygenase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB071 rbh
2-nitropropane dioxygenase {ECO:0000313|EMBL:KHA64740.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
SCNpilot_cont_750_bf_scaffold_4009_10
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6731..7261)
DNA (531bp) protein (177aa)
acetyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B54E68
Acetyltransferase {ECO:0000313|EMBL:AJP72667.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hexapeptide repeat-containing transferase
SCNpilot_cont_750_bf_scaffold_4009_11
unknown

Not on your lists

7361..7531
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_4009_12
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7586..7981)
DNA (396bp) protein (132aa)
MFS transporter n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B75464
Major Facilitator Superfamily protein {ECO:0000313|EMBL:EZP51749.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
putative MFS permease
Displaying 12 items

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