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SCNpilot_cont_750_bf_scaffold_4690

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_4690_1
Sphingomonas sp. JE1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..785
DNA (783bp) protein (261aa)
3-isopropylmalate dehydratase large subunit {ECO:0000313|EMBL:AJW29438.1}; EC=4.2.1.33 {ECO:0000313|EMBL:AJW29438.1};; TaxID=1628059 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. JE1.;"
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33 4.2.1.35); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IKL5_9SPHN
SCNpilot_cont_750_bf_scaffold_4690_2
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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782..1489
DNA (708bp) protein (236aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036468ED
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
SCNpilot_cont_750_bf_scaffold_4690_3
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1422..2000)
DNA (579bp) protein (193aa)
Putative transcriptional regulator, TetR family n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TTZ8_9BRAD
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:CCE09936.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
TetR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_4690_4
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2099..2764
DNA (666bp) protein (222aa)
O-methyltransferase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RZI3_9SPHN rbh
O-methyltransferase rbh
O-methyltransferase {ECO:0000313|EMBL:AGH49155.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_750_bf_scaffold_4690_5
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2710..3723)
DNA (1014bp) protein (338aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVA7_9SPHN rbh
DNA, contig: SP613 {ECO:0000313|EMBL:GAN12757.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
NAD-dependent epimerase/dehydratase
SCNpilot_cont_750_bf_scaffold_4690_6
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3814..4710
DNA (897bp) protein (299aa)
Bacterial regulatory helix-turn-helix , lysR family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVA9_9SPHN rbh
DNA, contig: SP613 {ECO:0000313|EMBL:GAN12758.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_750_bf_scaffold_4690_7
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4730..5878)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000377746A
Putative FAD-dependent monooxygenase {ECO:0000313|EMBL:ENN88169.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
monooxygenase, FAD-binding protein
SCNpilot_cont_750_bf_scaffold_4690_8
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5986..6687)
DNA (702bp) protein (234aa)
hypothetical protein; K00799 glutathione S-transferase [EC:2.5.1.18] rbh
Uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9H2Q5_GLUDA rbh
Uncharacterized protein {ECO:0000313|EMBL:CAP54185.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
Displaying 8 items

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