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SCNpilot_cont_750_bf_scaffold_6029

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_6029_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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70..522
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037F704D
Sphingomonas taxi strain 30a NODE_21, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26975.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_6029_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(637..1461)
DNA (825bp) protein (275aa)
2,5-diketo-d-gluconic acid reductase b n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LYD1_RHITR
2,5-diketo-d-gluconic acid reductase b
2,5-diketo-d-gluconic acid reductase b {ECO:0000313|EMBL:AGB75706.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_750_bf_scaffold_6029_3
bacterium YEK0313, Bacteria

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1577..2497
DNA (921bp) protein (307aa)
Transcriptional regulator, LysR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0M042_RHITR
HTH-type transcriptional regulator DmlR {ECO:0000313|EMBL:CEJ11143.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
transcriptional regulator, LysR family
SCNpilot_cont_750_bf_scaffold_6029_4
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2566..3174)
DNA (609bp) protein (203aa)
LigA n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IMJ3_ANADE
LigA
LigA {ECO:0000313|EMBL:ABC80021.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
SCNpilot_cont_750_bf_scaffold_6029_5
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3969..4259
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:AJA09231.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
SCNpilot_cont_750_bf_scaffold_6029_6
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4387..4893
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036ECD25
Uncharacterized protein {ECO:0000313|EMBL:AHE53432.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
transcriptional regulator, AraC family
SCNpilot_cont_750_bf_scaffold_6029_7
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4890..5294
DNA (405bp) protein (135aa)
glyoxalase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036CA356
Glyoxalase {ECO:0000313|EMBL:AHE53431.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_750_bf_scaffold_6029_8
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5346..5552
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000378EB07
Membrane protein {ECO:0000313|EMBL:KGE80335.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_6029_9
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5595..7424)
DNA (1830bp) protein (610aa)
UPI0003D00745 related cluster n=1 Tax=unknown RepID=UPI0003D00745
Uncharacterized protein {ECO:0000313|EMBL:EZP54198.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_6029_10
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7579..7968
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0GXI1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB08686.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_6029_11
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8140..8505
DNA (366bp) protein (122aa)
Putative inosine-5'-monophosphate dehydrogenase protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3PQR3_RHIE6
inosine-5'-monophosphate dehydrogenase
Putative inosine-5'-monophosphate dehydrogenase protein {ECO:0000313|EMBL:ACE91486.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
Displaying 11 items

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