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SCNpilot_cont_750_bf_scaffold_6668

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_6668_1
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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306..479
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000377B8B8
Sphingomonas taxi strain 30a NODE_18, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27661.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_750_bf_scaffold_6668_2
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(504..1850)
DNA (1347bp) protein (449aa)
Major facilitator transporter n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II60_9SPHN rbh
major facilitator superfamily transporter rbh
Major facilitator transporter {ECO:0000313|EMBL:CCA91502.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_750_bf_scaffold_6668_3
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1891..2385)
DNA (495bp) protein (165aa)
gluconokinase (EC:2.7.1.12); K00851 gluconokinase [EC:2.7.1.12]
Gluconokinase {ECO:0000313|EMBL:CCA91501.1}; EC=2.7.1.12 {ECO:0000313|EMBL:CCA91501.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
Gluconokinase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II59_9SPHN
SCNpilot_cont_750_bf_scaffold_6668_4
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2387..3268)
DNA (882bp) protein (294aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60) rbh
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:CCA91500.1}; EC=1.1.1.60 {ECO:0000313|EMBL:CCA91500.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
2-hydroxy-3-oxopropionate reductase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II58_9SPHN rbh
SCNpilot_cont_750_bf_scaffold_6668_5
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3270..4688)
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00035C9439 rbh
gluconate utilization system LacI family transcriptional regulator; K06145 LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor rbh
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor {ECO:0000313|EMBL:CCA91499.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_750_bf_scaffold_6668_6
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4685..5740)
DNA (1056bp) protein (352aa)
zinc-binding dehydrogenase; K00098 L-idonate 5-dehydrogenase [EC:1.1.1.264] rbh
Zinc-binding dehydrogenase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II55_9SPHN rbh
Zinc-binding dehydrogenase {ECO:0000313|EMBL:CCA91497.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_750_bf_scaffold_6668_7
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5887..6648
DNA (762bp) protein (254aa)
gluconate 5-dehydrogenase; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69] rbh
Gluconate 5-dehydrogenase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II54_9SPHN rbh
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:CCA91496.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_750_bf_scaffold_6668_8
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6657..7598
DNA (942bp) protein (314aa)
D-2-hydroxyacid dehydrogensase protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II53_9SPHN rbh
D-2-hydroxyacid dehydrogenase rbh
D-2-hydroxyacid dehydrogensase protein {ECO:0000313|EMBL:CCA91495.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_750_bf_scaffold_6668_9
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7595..8344
DNA (750bp) protein (250aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Novosphingobium sp. PP1Y RepID=F6II52_9SPHN rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CCA91494.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_750_bf_scaffold_6668_10
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8357..8518)
DNA (162bp) protein (54aa)
benzyl-alcohol dehydrogenase; K00055 aryl-alcohol dehydrogenase [EC:1.1.1.90]
Aryl-alcohol dehydrogenase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GZF5_CAUCN
Benzyl-alcohol dehydrogenase {ECO:0000313|EMBL:AAK24367.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
Displaying 10 items

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