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SCNpilot_cont_750_bf_scaffold_6766

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_6766_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..400
DNA (399bp) protein (133aa)
Benzoate 1,2-dioxygenase beta subunit {ECO:0000313|EMBL:GAO53241.1}; EC=1.14.12.10 {ECO:0000313|EMBL:GAO53241.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
aromatic-ring-hydroxylating dioxygenase subunit beta; K05550 benzoate/toluate 1,2-dioxygenase beta subunit [EC:1.14.12.10 1.14.12.-]
Aromatic-ring-hydroxylating dioxygenase beta subunit n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISI0_9SPHN
SCNpilot_cont_750_bf_scaffold_6766_2
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(438..1181)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NF28_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EAT09683.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
20S proteasome subunits A and B; K07395 putative proteasome-type protease rbh
SCNpilot_cont_750_bf_scaffold_6766_3
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1200..1976)
DNA (777bp) protein (259aa)
transglutaminase n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039E0781
transglutaminase domain family protein
Putative bacterial transglutaminase domain family protein {ECO:0000313|EMBL:ADZ70206.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_bf_scaffold_6766_4
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1976..2911)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K4E1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB31464.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_6766_5
Sphingobium lucknowense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2905..4245)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Sphingobium indicum B90A RepID=I5B9N2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KER35024.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lucknowense F2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_6766_6
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4469..5365
DNA (897bp) protein (299aa)
Diacylglycerol kinase catalytic domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RRX1_9PROT
Diacylglycerol kinase catalytic domain protein {ECO:0000313|EMBL:EFH09961.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
sphingosine kinase/eukaryotic diacylglycerol kinase; K07029
SCNpilot_cont_750_bf_scaffold_6766_7
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5449..7086)
DNA (1638bp) protein (546aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] rbh
thioredoxin reductase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CAB6F rbh
Thioredoxin reductase {ECO:0000313|EMBL:EJK84901.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
SCNpilot_cont_750_bf_scaffold_6766_8
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7083..7595)
DNA (513bp) protein (171aa)
cobU; adenosylcobinamide kinase (EC:2.7.1.156); K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
Cobinamide kinase / cobinamide phosphate guanyltransferase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2W6_9SPHN
CobP protein {ECO:0000313|EMBL:GAN14851.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_750_bf_scaffold_6766_9
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7632..8630
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035E6388 rbh
aminotransferase rbh
Aminotransferase {ECO:0000313|EMBL:AGH50282.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_750_bf_scaffold_6766_10
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8623..9462
DNA (840bp) protein (280aa)
adenosylcobinamide-phosphate synthase (EC:6.3.1.10); K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
adenosylcobinamide-phosphate synthase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489348
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_750_bf_scaffold_6766_11
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9571..10776
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002E10316 rbh
major facilitator transporter
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
SCNpilot_cont_750_bf_scaffold_6766_12
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10825..11934
DNA (1110bp) protein (370aa)
cobyric acid synthase (EC:6.3.5.10); K02232 adenosylcobyric acid synthase [EC:6.3.5.10]
Cobyric acid synthase n=1 Tax=Sphingomonas sp. S17 RepID=F3X2W3_9SPHN
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
Displaying 12 items

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