ggKbase home page

SCNpilot_cont_750_bf_scaffold_13586

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_13586_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..237)
DNA (237bp) protein (79aa)
conjugal transfer protein TraE n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C6BA
TraE protein {ECO:0000313|EMBL:GAN14660.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
TraE family protein; K12067 conjugal transfer pilus assembly protein TraE
SCNpilot_cont_750_bf_scaffold_13586_2
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(239..529)
DNA (291bp) protein (97aa)
Type IV conjugative transfer system protein TraL n=1 Tax=Sphingomonas sp. S17 RepID=F3X2C2_9SPHN
Conjugal transfer protein TraL {ECO:0000313|EMBL:AKH18757.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
Type IV conjugative transfer system protein TraL; K12068 conjugal transfer pilus assembly protein TraL
SCNpilot_cont_750_bf_scaffold_13586_3
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(591..881)
DNA (291bp) protein (97aa)
Putative membrane protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2C1_9SPHN
Membrane protein {ECO:0000313|EMBL:AKH18758.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_13586_4
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1276..1746
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2C0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AKH18759.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_13586_5
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1871..2377
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2B9_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:AKH18760.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_13586_6
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2410..2661)
DNA (252bp) protein (84aa)
Transglycosylase SLT domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X2B8_9SPHN
DNA, contig: SP643 {ECO:0000313|EMBL:GAN14655.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
lytic transglycosylase, catalytic
Displaying 6 items

View Taxonomy