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SCNpilot_cont_750_bf_scaffold_14886

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_14886_1
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1069)
DNA (1068bp) protein (356aa)
TonB-dependent receptor, plug n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC136
TonB-dependent receptor {ECO:0000313|EMBL:KFD25884.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
TonB-dependent receptor-like protein
SCNpilot_cont_750_bf_scaffold_14886_2
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1149..1931)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000288DE26
Uncharacterized protein {ECO:0000313|EMBL:AHE56594.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
EF-hand domain-containing protein
SCNpilot_cont_750_bf_scaffold_14886_3
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2207..3187
DNA (981bp) protein (327aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
dihydroorotate oxidase (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
diguanylate cyclase n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00030EA6B1
SCNpilot_cont_750_bf_scaffold_14886_4
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3313..3852
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000378F49A
Uncharacterized protein {ECO:0000313|EMBL:GAL99934.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_14886_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3855..5168
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI00028A2876
Uncharacterized protein {ECO:0000313|EMBL:GAO38791.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_14886_6

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comp(5615..5812)
DNA (198bp) protein (66aa)
preprotein translocase subunit SecE n=1 Tax=Sphingomonas melonis RepID=UPI00035C0D77
SecE/Sec61-gamma subunits of protein translocation complex {ECO:0000313|EMBL:AGU12248.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
SCNpilot_cont_750_bf_scaffold_14886_7

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6010..7065
DNA (1056bp) protein (352aa)
sulfotransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5F22B
Tetratricopeptide repeat {ECO:0000313|EMBL:AGU10228.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
Displaying 7 items

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