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SCNpilot_cont_750_bf_scaffold_5950

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_5950_1
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1411)
DNA (1410bp) protein (470aa)
copper-binding protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262BADE
Copper-binding protein {ECO:0000313|EMBL:AKH18794.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
copper resistance protein CopA
SCNpilot_cont_750_bf_scaffold_5950_2
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1479..2045)
DNA (567bp) protein (189aa)
FecI sigma-24 factor n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262BADD rbh
FecI sigma-24 factor {ECO:0000313|EMBL:KFG91477.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
rpoE; ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
SCNpilot_cont_750_bf_scaffold_5950_3
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2042..2482)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X1G4_9SPHN
Heavy metal resistance protein {ECO:0000313|EMBL:KFG91478.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_5950_4
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2479..2751)
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Sphingomonadaceae RepID=T0HYT9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHS45215.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_5950_5
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2884..3261
DNA (378bp) protein (126aa)
Copper resistance CopC family protein n=3 Tax=Sphingomonadaceae RepID=F3X1G6_9SPHN
Copper resistance protein CopC {ECO:0000313|EMBL:KEZ16493.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
copper resistance protein CopC; K07156
SCNpilot_cont_750_bf_scaffold_5950_6
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3266..4210
DNA (945bp) protein (315aa)
Copper resistance D family protein n=4 Tax=Sphingomonadaceae RepID=F3X1G7_9SPHN rbh
Copper resistance protein CopD {ECO:0000313|EMBL:EZP65398.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
copper resistance protein CopD rbh
SCNpilot_cont_750_bf_scaffold_5950_7
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4247..4687
DNA (441bp) protein (147aa)
UbiE/COQ5 methyltransferase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X1G8_9SPHN
UbiE/COQ5 methyltransferase family protein {ECO:0000313|EMBL:EZP65399.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase
Displaying 7 items

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