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SCNpilot_cont_750_bf_scaffold_3411

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_3411_1
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..272
DNA (270bp) protein (90aa)
alpha/beta hydrolase n=1 Tax=Pseudomonas pelagia RepID=UPI000399E2CA
Valocyclovir hydrolase {ECO:0000313|EMBL:AJK50364.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_750_bf_scaffold_3411_2
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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444..1049
DNA (606bp) protein (202aa)
Uncharacterized protein {ECO:0000313|EMBL:EZP73559.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
SCNpilot_cont_750_bf_scaffold_3411_3
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1395..4238)
DNA (2844bp) protein (948aa)
excinuclease ABC subunit A n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00035CF208
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
uvrA; excinuclease ABC subunit A
SCNpilot_cont_750_bf_scaffold_3411_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4369..4686
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003610331
Uncharacterized protein {ECO:0000313|EMBL:AIT07048.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_750_bf_scaffold_3411_5
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4770..5024
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289BCB8
Uncharacterized protein {ECO:0000313|EMBL:AIY40933.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3411_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5251..6030)
DNA (780bp) protein (260aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000365876A rbh
SCNpilot_cont_750_bf_scaffold_3411_7
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6131..6970)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036FAEEB
Sphingomonas taxi strain 30a NODE_20, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27081.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_750_bf_scaffold_3411_8
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7030..7899)
DNA (870bp) protein (290aa)
esterase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5BE7B rbh
Esterase {ECO:0000313|EMBL:KHA64021.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
esterase
SCNpilot_cont_750_bf_scaffold_3411_9
unknown

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comp(8005..8163)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_3411_10

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8271..8747
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036D9249
LysR substrate binding domain {ECO:0000313|EMBL:AGU11809.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
LysR family transcriptional regulator; K03566 LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Displaying 10 items

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