ggKbase home page

SCNpilot_cont_750_bf_scaffold_3610

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_3610_1
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..510)
DNA (510bp) protein (170aa)
Pilus assembly protein CpaC n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EIT7_9SPHN
Pilus assembly protein CpaC {ECO:0000313|EMBL:EHJ58696.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
pilus assembly protein CpaC; K02280 pilus assembly protein CpaC
SCNpilot_cont_750_bf_scaffold_3610_2
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(500..1384)
DNA (885bp) protein (295aa)
Pilus assembly protein CpaB n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IPU7_9SPHN
pilus assembly protein CpaB; K02279 pilus assembly protein CpaB
Pilus assembly protein CpaB {ECO:0000313|EMBL:CCA93449.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_750_bf_scaffold_3610_3
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1407..1595)
DNA (189bp) protein (63aa)
Pilus subunit protein PilA n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EIT5_9SPHN
Pilus subunit protein PilA {ECO:0000313|EMBL:EHJ58694.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
pilus subunit protein PilA; K02651 pilus assembly protein Flp/PilA
SCNpilot_cont_750_bf_scaffold_3610_4
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2000..2839
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EIT4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ58693.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3610_5
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3046..4386
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4PX14_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:KFG70789.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
SCNpilot_cont_750_bf_scaffold_3610_6
unknown

Not on your lists

4383..4919
DNA (537bp) protein (179aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_3610_7
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4916..5299
DNA (384bp) protein (128aa)
TadE family protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ERQ9_METSB
TadE family protein
TadE family protein {ECO:0000313|EMBL:ACK51607.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_750_bf_scaffold_3610_8
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5326..5931
DNA (606bp) protein (202aa)
Peptidase M23B n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EIU8_9SPHN
Peptidase M23B {ECO:0000313|EMBL:EHJ58707.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
peptidase M23B
SCNpilot_cont_750_bf_scaffold_3610_9
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

6083..6679
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037297E6
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein {ECO:0000313|EMBL:AFL88784.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
SCNpilot_cont_750_bf_scaffold_3610_10
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6692..7669
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349FB11 rbh
Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS {ECO:0000313|EMBL:CDY77713.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
molybdopterin dehydrogenase FAD-binding rbh
Displaying 10 items

View Taxonomy