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SCNpilot_cont_750_bf_scaffold_3621

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_3621_1
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..379)
DNA (378bp) protein (126aa)
LysR family transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC8D5
LysR family transcriptional regulator {ECO:0000313|EMBL:AJP71019.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
LysR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_3621_2
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(376..774)
DNA (399bp) protein (133aa)
magnesium transporter ApaG n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00031E0408
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
apaG; ApaG protein; K06195 ApaG protein
SCNpilot_cont_750_bf_scaffold_3621_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(771..1979)
DNA (1209bp) protein (403aa)
O-succinylhomoserine sulfhydrylase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC8D7 rbh
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:AIT06647.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
cystathionine gamma-synthase rbh
SCNpilot_cont_750_bf_scaffold_3621_4
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2193..3458
DNA (1266bp) protein (422aa)
dolichyl-phosphate-mannose-protein mannosyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B63366
Dolichyl-phosphate-mannose-mannosyltransferase family protein {ECO:0000313|EMBL:EZP52947.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3621_5
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3500..4543)
DNA (1044bp) protein (348aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85) rbh
3-isopropylmalate dehydrogenase n=1 Tax=Sphingomonas melonis RepID=UPI00036DE76C
SCNpilot_cont_750_bf_scaffold_3621_6
unknown

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4885..5226
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_3621_7
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5402..6283)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003701817
Uncharacterized protein {ECO:0000313|EMBL:AIT06652.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3621_8
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6280..7227)
DNA (948bp) protein (316aa)
polysaccharide deacetylase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC8DE rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:AJP71062.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
polysaccharide deacetylase
SCNpilot_cont_750_bf_scaffold_3621_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7367..10057)
DNA (2691bp) protein (897aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000364E0DF
Uncharacterized protein {ECO:0000313|EMBL:AJP71061.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3621_10
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10116..12038)
DNA (1923bp) protein (641aa)
excinuclease ABC subunit C n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6CBF8
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
uvrC; excinuclease ABC subunit C
SCNpilot_cont_750_bf_scaffold_3621_11
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12114..12893
DNA (780bp) protein (260aa)
Putative methyltransferase n=1 Tax=Caulobacter sp. AP07 RepID=J2H5L2_9CAUL
Putative methyltransferase {ECO:0000313|EMBL:EJL30683.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3621_12
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12890..13276
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1XMG7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EZP41049.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3621_13
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13420..14655
DNA (1236bp) protein (412aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphing
purF; amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14]
amidophosphoribosyltransferase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000375E944
Displaying 13 items

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