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SCNpilot_cont_750_bf_scaffold_3675

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_3675_1
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..430
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI0003810FC7
Uncharacterized protein {ECO:0000313|EMBL:KKC23753.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3675_2
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

442..1218
DNA (777bp) protein (259aa)
glyoxalase n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00036AD777
glyoxalase/bleomycin resistance protein/dioxygenase; K06996
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:GAN48708.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
SCNpilot_cont_750_bf_scaffold_3675_3
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1243..1695
DNA (453bp) protein (151aa)
UPI0003D00975 related cluster n=1 Tax=unknown RepID=UPI0003D00975
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:ESZ19299.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3675_4
gamma proteobacterium BDW918, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1700..2182
DNA (483bp) protein (161aa)
ATPase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA623
Uncharacterized protein {ECO:0000313|EMBL:EIF43388.1}; TaxID=1168065 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium BDW918.;"
activator of hsp90 ATPase 1 family protein
SCNpilot_cont_750_bf_scaffold_3675_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2175..2834
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036B5050
riboflavin biosynthesis protein
Putative riboflavin biosynthesis protein {ECO:0000313|EMBL:CAK08768.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_cont_750_bf_scaffold_3675_6
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2990..3589)
DNA (600bp) protein (200aa)
molecular chaperone DnaJ n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000371B2DF
DnaJ domain protein {ECO:0000313|EMBL:EZP54630.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
heat shock protein DnaJ domain-containing protein
SCNpilot_cont_750_bf_scaffold_3675_7
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3633..3923
DNA (291bp) protein (97aa)
BolA-like family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WU89_9SPHN
DNA, contig: SP619 {ECO:0000313|EMBL:GAN13520.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
transcriptional regulator BolA; K05527 BolA protein
SCNpilot_cont_750_bf_scaffold_3675_8
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3920..4366
DNA (447bp) protein (149aa)
NUDIX domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WU87_9SPHN
Putative hydrolase {ECO:0000313|EMBL:GAM02503.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
MutT/NUDIX family hydrolase
SCNpilot_cont_750_bf_scaffold_3675_9
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4473..5345)
DNA (873bp) protein (291aa)
putative SAM-dependent methyltransferase; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
SAM-dependent methyltransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B56D8D
Uncharacterized protein {ECO:0000313|EMBL:GAM00919.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
SCNpilot_cont_750_bf_scaffold_3675_10
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5350..6744)
DNA (1395bp) protein (465aa)
Threonine synthase {ECO:0000313|EMBL:EZP56110.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EZP56110.1};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
thrC; threonine synthase; K01733 threonine synthase [EC:4.2.3.1]
threonine synthase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000372406F
SCNpilot_cont_750_bf_scaffold_3675_11
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6756..7373)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B71926
Sphingomonas taxi strain 30a NODE_43, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26337.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3675_12
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7370..8677)
DNA (1308bp) protein (436aa)
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1]
cytochrome B562 n=1 Tax=Sphingomonas melonis RepID=UPI0003709974
Cytochrome B562 {ECO:0000313|EMBL:KHA63636.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
SCNpilot_cont_750_bf_scaffold_3675_13
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8711..9250)
DNA (540bp) protein (180aa)
cytochrome C oxidase assembly protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B42D1E rbh
Cytochrome c oxidase assembly protein CtaG {ECO:0000256|HAMAP-Rule:MF_00155}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
cox11; cytochrome c oxidase subunit XI assembly protein; K02258 cytochrome c oxidase assembly protein subunit 11
SCNpilot_cont_750_bf_scaffold_3675_14
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9247..9387)
DNA (141bp) protein (47aa)
Uncharacterized protein {ECO:0000313|EMBL:EZP56126.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
SCNpilot_cont_750_bf_scaffold_3675_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9384..9824)
DNA (441bp) protein (147aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
protoheme IX farnesyltransferase (EC:2.5.1.-)
protoheme IX farnesyltransferase n=2 Tax=Sphingomonas melonis RepID=UPI000381947F
SCNpilot_cont_750_bf_scaffold_3675_16
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10339..10881)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0HB67_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA96624.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3675_17

Not on your lists

comp(10904..11473)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036AB9F8
Cobalamin adenosyltransferase {ECO:0000313|EMBL:AGU10274.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
ATP:cob(I)alamin adenosyltransferase
SCNpilot_cont_750_bf_scaffold_3675_18
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11617..11853)
DNA (237bp) protein (79aa)
Putative membrane protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WYX5_9SPHN
DNA, contig: SP642 {ECO:0000313|EMBL:GAN14486.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3675_19
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11864..12706)
DNA (843bp) protein (281aa)
glutamyl-tRNA synthetase; K01894 glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037AB9C4
DNA, contig: SP642 {ECO:0000313|EMBL:GAN14487.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_750_bf_scaffold_3675_20
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12854..14224
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002898443 rbh
Putative bacteriophage N4 adsorption protein B {ECO:0000313|EMBL:GAM01030.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
putative bacteriophage N4 adsorption protein B
SCNpilot_cont_750_bf_scaffold_3675_21
unknown

Not on your lists

14221..14499
DNA (279bp) protein (93aa)

This feature has no annotations

Displaying 21 items

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