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SCNpilot_cont_750_bf_scaffold_3691

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_3691_1
unknown

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comp(2..166)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_3691_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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449..3394
DNA (2946bp) protein (982aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B43D0C
TonB-dependent receptor-like protein
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK67434.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_cont_750_bf_scaffold_3691_3
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3447..4247)
DNA (801bp) protein (267aa)
hypothetical protein; K15918 D-glycerate 3-kinase [EC:2.7.1.31]
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00030796E9
Putative kinase {ECO:0000313|EMBL:KFL47332.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
SCNpilot_cont_750_bf_scaffold_3691_4
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4244..5218)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002E8A09F rbh
Glyoxylate reductase {ECO:0000313|EMBL:KFL47331.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase rbh
SCNpilot_cont_750_bf_scaffold_3691_5
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5215..6132)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003196D77 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL47330.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
tfdA; alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase rbh
SCNpilot_cont_750_bf_scaffold_3691_6
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6123..7214)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000302B9EF rbh
Putative MFS permease {ECO:0000313|EMBL:KFL47329.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
putative aromatic acid transporter; K08195 MFS transporter, AAHS family, 4-hydroxybenzoate transporter
SCNpilot_cont_750_bf_scaffold_3691_7
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7211..7441)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000302B9EF
putative aromatic acid transporter; K08195 MFS transporter, AAHS family, 4-hydroxybenzoate transporter
Tax=GWF1_Sphingomonadales_63_6_curated
SCNpilot_cont_750_bf_scaffold_3691_8
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7450..10347)
DNA (2898bp) protein (966aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00035EB1DF rbh
TonB-dependent receptor-like protein {ECO:0000313|EMBL:KFL47328.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
TonB-dependent receptor
SCNpilot_cont_750_bf_scaffold_3691_9
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10493..11023
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002D5B847
Uncharacterized protein {ECO:0000313|EMBL:KFL47327.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
MarR family transcriptional regulator; K06075 MarR family transcriptional regulator, transcriptional regulator for hemolysin
SCNpilot_cont_750_bf_scaffold_3691_10
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11107..11820
DNA (714bp) protein (238aa)
Alpha/beta hydrolase fold protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QIV5_BRESC
alpha/beta hydrolase
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADL01438.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
SCNpilot_cont_750_bf_scaffold_3691_11
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11817..13214
DNA (1398bp) protein (466aa)
Glycine cleavage T protein (Aminomethyl transferase) n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IE36_9SPHN rbh
glycine cleavage T protein (aminomethyl transferase) rbh
Glycine cleavage T protein (Aminomethyl transferase) {ECO:0000313|EMBL:CCA90561.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_750_bf_scaffold_3691_12
unknown

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comp(13255..13419)
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying 12 items

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