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SCNpilot_cont_750_bf_scaffold_3779

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_3779_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..224
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9C3F
DNA, contig: SP657 {ECO:0000313|EMBL:GAN15444.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_750_bf_scaffold_3779_2
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(287..1048)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6A7AE
Eukaryotic translation initiation factor 3 subunit 10 {ECO:0000313|EMBL:AJR23190.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3779_3
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1315..2133)
DNA (819bp) protein (273aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomon
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (EC:2.1.1.-) rbh
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000369E5F3 rbh
SCNpilot_cont_750_bf_scaffold_3779_4
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2161..2727)
DNA (567bp) protein (189aa)
peptide chain release factor 1 n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9C3A
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1
SCNpilot_cont_750_bf_scaffold_3779_5

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comp(3178..4425)
DNA (1248bp) protein (416aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] rbh
Histidyl-tRNA synthetase n=1 Tax=uncultured organism RepID=T1W798_9ZZZZ rbh
Histidyl-tRNA synthetase {ECO:0000313|EMBL:AGU10404.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
SCNpilot_cont_750_bf_scaffold_3779_6
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4477..5133
DNA (657bp) protein (219aa)
membrane protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B66CA7
Uncharacterized protein {ECO:0000313|EMBL:EZP49333.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3779_7
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5187..7112
DNA (1926bp) protein (642aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035F3484 rbh
Sphingomonas taxi strain 30a NODE_36, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26286.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
trypsin-like serine protease rbh
SCNpilot_cont_750_bf_scaffold_3779_8
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7196..7735
DNA (540bp) protein (180aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
inorganic pyrophosphatase; K01507 inorganic pyrophosphatase [EC:3.6.1.1]
Inorganic pyrophosphatase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJR0_9SPHN
SCNpilot_cont_750_bf_scaffold_3779_9
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7748..8095)
DNA (348bp) protein (116aa)
competence protein TfoX n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000288E35F
Uncharacterized protein {ECO:0000313|EMBL:AHE57379.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
tfoX; DNA transformation protein; K07343 DNA transformation protein and related proteins
SCNpilot_cont_750_bf_scaffold_3779_10
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8092..8406)
DNA (315bp) protein (105aa)
cation transporter n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489374
small multidrug resistance protein
Small multidrug resistance protein {ECO:0000313|EMBL:AGH49382.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_750_bf_scaffold_3779_11
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8406..8888)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037DB6A1
DNA, contig: SP657 {ECO:0000313|EMBL:GAN15434.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_3779_12
unknown

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comp(8899..9045)
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 12 items

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