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SCNpilot_cont_750_bf_scaffold_8195

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_8195_1
unknown

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comp(3..89)
DNA (87bp) protein (29aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_8195_2
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(129..452)
DNA (324bp) protein (108aa)
RNA polymerase sigma factor RpoD n=1 Tax=Sphingomonas melonis RepID=UPI00037E81AB
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
RNA polymerase sigma 70 subunit RpoD; K03086 RNA polymerase primary sigma factor
SCNpilot_cont_750_bf_scaffold_8195_3
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(452..2329)
DNA (1878bp) protein (626aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
DNA primase; K02316 DNA primase [EC:2.7.7.-] rbh
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003725697
SCNpilot_cont_750_bf_scaffold_8195_4
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2441..2893)
DNA (453bp) protein (151aa)
aspartyl-tRNA amidotransferase subunit B n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003794021
DNA, contig: SP611 {ECO:0000313|EMBL:GAN12583.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
GatB/Yqey domain-containing protein
SCNpilot_cont_750_bf_scaffold_8195_5
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2999..3835
DNA (837bp) protein (279aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
carA; carbamoyl-phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
carbamoyl phosphate synthase small subunit n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035F824F
Displaying 5 items

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