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SCNpilot_cont_750_bf_scaffold_8386

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_8386_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1127)
DNA (1125bp) protein (375aa)
phosphoenolpyruvate-protein phosphotransferase PtsP; K08484 phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Sphingomonas sp. S17 RepID=F3WZ92_9SPHN
PtsP protein {ECO:0000313|EMBL:GAN11995.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
SCNpilot_cont_750_bf_scaffold_8386_2
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1357..2379)
DNA (1023bp) protein (341aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
ruvB; Holliday junction DNA helicase RuvB (EC:3.6.1.-) rbh
Holliday junction DNA helicase RuvB n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B586A7
SCNpilot_cont_750_bf_scaffold_8386_3
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2376..2975)
DNA (600bp) protein (200aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
Holliday junction ATP-dependent DNA helicase ruvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12]
Holliday junction DNA helicase RuvA n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003802CEE
SCNpilot_cont_750_bf_scaffold_8386_4
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3286..3774)
DNA (489bp) protein (163aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
ruvC; Holliday junction resolvase (EC:3.1.22.4)
crossover junction endodeoxyribonuclease RuvC n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000288654D
SCNpilot_cont_750_bf_scaffold_8386_5
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3834..4583)
DNA (750bp) protein (250aa)
Probable transcriptional regulatory protein SUS17_3945 n=1 Tax=Sphingomonas sp. S17 RepID=F3X3C5_9SPHN rbh
Probable transcriptional regulatory protein SP5_018_00080 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein rbh
Displaying 5 items

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