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SCNpilot_cont_750_bf_scaffold_8944

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_8944_1
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..203)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z7K4_SPHJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQB02606.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
SCNpilot_cont_750_bf_scaffold_8944_2
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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421..1320
DNA (900bp) protein (300aa)
Metallophosphoesterase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IDY2_XANP2
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ABS66225.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_750_bf_scaffold_8944_3
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1343..1705
DNA (363bp) protein (121aa)
PREDICTED: plastocyanin, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C19BEA
blue (type1) copper domain-containing protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ABS66226.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_750_bf_scaffold_8944_4
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1737..2339
DNA (603bp) protein (201aa)
RNA polymerase sigma factor n=1 Tax=Microvirga sp. WSM3557 RepID=I4YKK2_9RHIZ
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAO39197.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_750_bf_scaffold_8944_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2336..3109
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCF66
Uncharacterized protein {ECO:0000313|EMBL:GAO39196.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
putative transmembrane anti-sigma factor
SCNpilot_cont_750_bf_scaffold_8944_6
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3620..4822
DNA (1203bp) protein (401aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1KB73_BURCC
Membrane protein {ECO:0000313|EMBL:KFX26496.1}; Flags: Fragment;; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
outer membrane autotransporter
Displaying 6 items

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