ggKbase home page

SCNpilot_cont_750_bf_scaffold_9135

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_9135_1
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

284..934
DNA (651bp) protein (217aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17); K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17]
cobinamide adenolsyltransferase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000370FF07 rbh
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:KEZ18943.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_750_bf_scaffold_9135_2
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1093..2760)
DNA (1668bp) protein (556aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036513EE
Uncharacterized protein {ECO:0000313|EMBL:EQB09000.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
acid phosphatase
SCNpilot_cont_750_bf_scaffold_9135_3
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2957..3217
DNA (261bp) protein (87aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBX5_9SPHN
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:KGB57991.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
glyoxalase/bleomycin resistance protein/dioxygenase; K04750 PhnB protein
SCNpilot_cont_750_bf_scaffold_9135_4
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3307..4029
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002E18FE3 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABQ68177.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_750_bf_scaffold_9135_5
unknown

Not on your lists

comp(4067..4243)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_9135_6
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4360..5262)
DNA (903bp) protein (301aa)
Transcriptional regulator n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S252_9SPHN rbh
transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:AGH48559.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_750_bf_scaffold_9135_7
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5471..6379
DNA (909bp) protein (303aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0V8_9SPHN
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AGH48558.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_750_bf_scaffold_9135_8
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6412..7320
DNA (909bp) protein (303aa)
Aldo/keto reductase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SJU9_9SPHN rbh
aldo/keto reductase rbh
Aldo/keto reductase {ECO:0000313|EMBL:AGH50857.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_750_bf_scaffold_9135_9
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7441..7995)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00037E0EAC
Uncharacterized protein {ECO:0000313|EMBL:KGH25328.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
SCNpilot_cont_750_bf_scaffold_9135_10
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8170..9036
DNA (867bp) protein (289aa)
AraC family transcriptional regulator n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S8P6_9SPHN rbh
AraC family transcriptional regulator rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:AGH50889.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_750_bf_scaffold_9135_11
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9140..9730)
DNA (591bp) protein (197aa)
Transcriptional regulator, TetR family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VBM4_SPHWW
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABQ69690.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_750_bf_scaffold_9135_12
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9864..10103
DNA (240bp) protein (80aa)
amidohydrolase n=1 Tax=Sphingomonas wittichii RepID=UPI00036B8F92
amidohydrolase 3
Amidohydrolase 3 {ECO:0000313|EMBL:ABQ69691.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
Displaying 12 items

View Taxonomy