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SCNpilot_cont_750_bf_scaffold_11560

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_11560_1
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1731)
DNA (1731bp) protein (577aa)
TonB-dependent receptor n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7P2_NOVAD rbh
TonB-dependent receptor rbh
TonB-dependent receptor {ECO:0000313|EMBL:ABD26131.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCNpilot_cont_750_bf_scaffold_11560_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1746..2231)
DNA (486bp) protein (162aa)
Cytochrome c, class I n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7P3_NOVAD
Cytochrome c in methylamine utilization cluster {ECO:0000313|EMBL:GAO57025.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
cytochrome c, class I
SCNpilot_cont_750_bf_scaffold_11560_3
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2228..2674)
DNA (447bp) protein (149aa)
Cytochrome c, class I n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7P4_NOVAD
cytochrome c, class I
Cytochrome c, class I {ECO:0000313|EMBL:ABD26129.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCNpilot_cont_750_bf_scaffold_11560_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2671..3219)
DNA (549bp) protein (183aa)
Methylamine dehydrogenase light chain {ECO:0000313|EMBL:GAO57023.1}; EC=1.4.9.1 {ECO:0000313|EMBL:GAO57023.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
amine dehydrogenase (EC:1.4.99.3); K15228 methylamine dehydrogenase light chain [EC:1.4.9.1] rbh
Amine dehydrogenase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z5K2_9SPHN rbh
SCNpilot_cont_750_bf_scaffold_11560_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3223..3654)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7P6_NOVAD
Methylamine utilization protein mauD {ECO:0000313|EMBL:GAO57022.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_11560_6
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3760..4257)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7P7_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD26126.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
SCNpilot_cont_750_bf_scaffold_11560_7
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4254..5333)
DNA (1080bp) protein (360aa)
amine dehydrogenase (EC:1.4.99.3); K15229 methylamine dehydrogenase heavy chain [EC:1.4.9.1]
amine dehydrogenase n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI00036826DF
Amine dehydrogenase {ECO:0000313|EMBL:EGD60114.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
Displaying 7 items

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