ggKbase home page

SCNpilot_cont_750_bf_scaffold_15658

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_15658_1
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148..417
DNA (270bp) protein (90aa)
conjugal transfer protein TrbC n=1 Tax=Sphingomonas elodea RepID=UPI0002630A75
conjugal transfer protein Trbc; K03197 type IV secretion system protein VirB2
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
SCNpilot_cont_750_bf_scaffold_15658_2
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

421..705
DNA (285bp) protein (95aa)
type VI secretion protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630A76
Uncharacterized protein {ECO:0000313|EMBL:AJA08924.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
type IV secretory pathway VirB3 family protein; K03198 type IV secretion system protein VirB3
SCNpilot_cont_750_bf_scaffold_15658_3
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

684..2978
DNA (2295bp) protein (765aa)
type VI secretion protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5C0A8 rbh
Type IV secretion system protein VirB4 {ECO:0000313|EMBL:AJA08925.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
type IV secretion/conjugal transfer ATPase VirB4 family; K03199 type IV secretion system protein VirB4 rbh
SCNpilot_cont_750_bf_scaffold_15658_4
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2978..4156
DNA (1179bp) protein (393aa)
conjugal transfer protein TrbL n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5935F rbh
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:AJA08926.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
TrbL/VirB6 plasmid conjugal transfer protein; K03201 type IV secretion system protein VirB6
SCNpilot_cont_750_bf_scaffold_15658_5
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4153..5040
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630A79 rbh
VirB8 family protein {ECO:0000313|EMBL:AJA08927.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
VirB8 family protein
SCNpilot_cont_750_bf_scaffold_15658_6
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5037..5645
DNA (609bp) protein (203aa)
type VI secretion protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B47267
Conjugal transfer protein trbg/virb9/cagx {ECO:0000313|EMBL:AJA08928.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
avhB9a; type IV secretion protein; K03204 type IV secretion system protein VirB9
Displaying 6 items

View Taxonomy