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SCNpilot_cont_750_bf_scaffold_2070_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 894..1412

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WW40_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 171.0
  • Bit_score: 197
  • Evalue 1.20e-47
DNA, contig: SP663 {ECO:0000313|EMBL:GAN15690.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 171.0
  • Bit_score: 197
  • Evalue 1.70e-47
RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 166.0
  • Bit_score: 156
  • Evalue 9.80e-36

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGAACGAATCCAATCTGCTATTGTCCACGTTCATGCAGCGCAGAGCGAGCCTGTTACGCTATTTCGCGGCGCGCGTCGGCGAGGCCGAGGCCGAGGATCTGGTGCAGGAAACCTGGCTTCGCGTGGCATCCCAGCCCGCCGTCGGCGAGGTCCGCAATCCCGCCGCCTATCTGTATCGGCTGTGCGGCAACGTCATGCTCGATCGGCTGCGACAGGAGCGCAGCCGCGCCGCGCGCGATGCCGAATGGCGCCGGGTGAACCGCACCCTCGTCGCCAATGGCGAGGAAGTGTGCGAGGACGTGCCCGCCGACAACGCGCTGATCGCGCGCGATCGCCTGCGCCGCATCCGCGCCGCGCTCGACGATCTGCCCGCGCCGGTGCGGCGGACGTTTCGCCTGCACAAATTCGAGGGGCTCTCGCACAGCGAGGTTGCCGCCGAGCTCGGCGTTTCGCGCAGCCTCGTCGAGAAACATATGATGCGCGCGCTCAAGCATCTGATCGCGAGGGTCGGGCGATGA
PROTEIN sequence
Length: 173
MNESNLLLSTFMQRRASLLRYFAARVGEAEAEDLVQETWLRVASQPAVGEVRNPAAYLYRLCGNVMLDRLRQERSRAARDAEWRRVNRTLVANGEEVCEDVPADNALIARDRLRRIRAALDDLPAPVRRTFRLHKFEGLSHSEVAAELGVSRSLVEKHMMRALKHLIARVGR*