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SCNpilot_cont_750_bf_scaffold_3340_5

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(2373..3035)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000313|EMBL:EZP54652.1}; EC=5.4.99.- {ECO:0000313|EMBL:EZP54652.1};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 211.0
  • Bit_score: 324
  • Evalue 9.10e-86
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 219.0
  • Bit_score: 303
  • Evalue 4.90e-80
  • rbh
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036140D4 similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 209.0
  • Bit_score: 351
  • Evalue 8.50e-94

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGTTGGGCGAGAAAGTGCTGTTCCTCGATGGCGAGGCCTTGGTGATCGACAAGCCGGCGGGCTTGCCGGTCGATCGGCCGCGCGACGGCGCGATCAGCCTCGAAAACCATCTCAACAGCCTGACCTTCGGGTTCAAGCGCTGGCCGCAGCCGGTGCATCGGCTCGATCGCGATACCAGCGGCTGCCTTTTGCTGTCGCGCAACCCCAAGGCGCATGCGCGCTTCCAGCAGGCGTTCGAAAGCGGCGCGGTGCAGAAACGGTATCTTGCAGTGCTCGACGGCGTGCCGGCGGGCGAGAGCGGCGAGATCGATTTGCCGCTCGCCAAGGTCTCGACCCGCGAGCGCGGCTGGTGGATGACCGGCGACGCCAAAAAGGGCAAGGCGGCGCGCACCGCGTGGCGGCTGATCGCGGCGCGCGACGGGCTGGGGCTGGTCGAATTCCGCCCCGCGACCGGGCGCACCCACCAGATCCGCGTTCATGCGCTCGAAGGGCTGGGACATGCGGTGGTCGGCGACCCCGTCTATGGCACGGCGCATCCGGCGGGGATGATGCTCCACGCCGCCGAGCTGATCGTGCCGCGCGCGGGGAAAGAGGATGTCGCGGCGGTCGCGCCCTGGCCCGAGCGATTCGCCAAAATCGGATTCGGTGACCCGGATGCCTGA
PROTEIN sequence
Length: 221
MLGEKVLFLDGEALVIDKPAGLPVDRPRDGAISLENHLNSLTFGFKRWPQPVHRLDRDTSGCLLLSRNPKAHARFQQAFESGAVQKRYLAVLDGVPAGESGEIDLPLAKVSTRERGWWMTGDAKKGKAARTAWRLIAARDGLGLVEFRPATGRTHQIRVHALEGLGHAVVGDPVYGTAHPAGMMLHAAELIVPRAGKEDVAAVAPWPERFAKIGFGDPDA*