ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_cont_750_bf_scaffold_8247_6

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

partial RP 17 / 55 MC: 1 BSCG 17 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(4328..4675)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037C9219 similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 120.0
  • Bit_score: 108
  • Evalue 3.80e-21
Uncharacterized protein {ECO:0000313|EMBL:KEZ18537.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 113.0
  • Bit_score: 96
  • Evalue 2.80e-17
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 108.0
  • Bit_score: 76
  • Evalue 6.60e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium yanoikuyae → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGAAGCCGATCATCCCGATATTGCTCACGACGACGCTGCTCGCCGGCTGCAAGGCGCAGCCCGTCGCGACGACGAGCGAGGTCACCGGCATCGCCTGCGCCCCCGGCGGCGCGGCGAACTTTGCCCCGGACTGCGGGCTGGATCGTATGCCGACGGCGCGCGGGACAGTGCTCGTGCTGCGTCACCCCGACGGTGGGTTCCGCCGCCTGCTGGCGAGCAAGGACGGGCTGGTCGCGGCCGACGGCGCCGAGCCGGCGAAAGTCACCAAGCTCGACAAAGGCATGATCGAGGTTGCGCTCGGCACGAACCGCTATCGCCTGCCGGCGACGCTCGGTGCGCGGCCGTGA
PROTEIN sequence
Length: 116
MKPIIPILLTTTLLAGCKAQPVATTSEVTGIACAPGGAANFAPDCGLDRMPTARGTVLVLRHPDGGFRRLLASKDGLVAADGAEPAKVTKLDKGMIEVALGTNRYRLPATLGARP*