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SCNpilot_cont_750_bf_scaffold_8247

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_8247_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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107..1078
DNA (972bp) protein (324aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] rbh
Methionyl-tRNA formyltransferase n=1 Tax=Sphingomonas sp. S17 RepID=F3WST5_9SPHN
SCNpilot_cont_750_bf_scaffold_8247_2
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1075..1821
DNA (747bp) protein (249aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) rbh
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
tRNA pseudouridine synthase A n=1 Tax=Sphingomonas echinoides RepID=UPI00026C9BAF rbh
SCNpilot_cont_750_bf_scaffold_8247_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1793..2242)
DNA (450bp) protein (150aa)
(uracil-5)-methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
RNA methyltransferase n=1 Tax=Sphingomonas melonis RepID=UPI000365F301
RNA methyltransferase {ECO:0000313|EMBL:AIT05510.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCNpilot_cont_750_bf_scaffold_8247_4
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2185..2943)
DNA (759bp) protein (253aa)
23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-); K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000375EB3F
Uncharacterized protein {ECO:0000313|EMBL:EZP49061.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
SCNpilot_cont_750_bf_scaffold_8247_5
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2934..4328)
DNA (1395bp) protein (465aa)
carbohydrate kinase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6DA19 rbh
DNA, contig: SP614 {ECO:0000313|EMBL:GAN13023.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
carbohydrate kinase, YjeF-like protein rbh
SCNpilot_cont_750_bf_scaffold_8247_6
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4328..4675)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037C9219
Uncharacterized protein {ECO:0000313|EMBL:KEZ18537.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_8247_7
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4722..5072)
DNA (351bp) protein (117aa)
sensory transduction regulatory protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6B168
DNA, contig: SP614 {ECO:0000313|EMBL:GAN13026.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
response regulator receiver protein
SCNpilot_cont_750_bf_scaffold_8247_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5113..6066)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000367E5C5
Sphingomonas taxi strain 30a NODE_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29241.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
multi-sensor hybrid histidine kinase
Displaying 8 items

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