ggKbase home page

SCNpilot_cont_750_bf_scaffold_900

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_900_1
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(509..1306)
DNA (798bp) protein (266aa)
IclR family transcriptional regulator n=1 Tax=Rhodococcus opacus M213 RepID=K8XMI4_RHOOP
IclR family transcriptional regulator {ECO:0000313|EMBL:EKT78290.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
transcriptional regulator, IclR family
SCNpilot_cont_750_bf_scaffold_900_2
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1387..2286)
DNA (900bp) protein (300aa)
xylose isomerase n=1 Tax=Streptomyces rapamycinicus RepID=UPI000382FA7B
Xylose isomerase {ECO:0000313|EMBL:AGP59242.1}; TaxID=1343740 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
xylose isomerase
SCNpilot_cont_750_bf_scaffold_900_3
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

Not on your lists

comp(2349..3383)
DNA (1035bp) protein (345aa)
PfkB domain-containing protein; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] rbh
PfkB domain protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CM54_DESK7 rbh
Tax=RBG_16_Armatimonadetes_58_9_curated
SCNpilot_cont_750_bf_scaffold_900_4
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

Not on your lists

comp(3380..4048)
DNA (669bp) protein (223aa)
2-keto-3-deoxy-phosphogluconate aldolase (EC:4.1.2.14); K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46D0 id=1245511 bin=RBG9 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG9 organism_group=Chloroflexi
Tax=RBG_16_Armatimonadetes_58_9_curated
SCNpilot_cont_750_bf_scaffold_900_5
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4093..4851)
DNA (759bp) protein (253aa)
short-chain dehydrogenase/reductase SDR; K00046 gluconate 5-dehydrogenase [EC:1.1.1.69]
gluconate 5-dehydrogenase n=1 Tax=Burkholderia sp. JPY251 RepID=UPI000380ED6F
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADG18260.1}; Flags: Precursor;; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;"
SCNpilot_cont_750_bf_scaffold_900_6
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4971..5747)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003739FAA
Uncharacterized protein {ECO:0000313|EMBL:KID31907.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_750_bf_scaffold_900_7
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5744..6802)
DNA (1059bp) protein (353aa)
xylose isomerase n=1 Tax=Humibacter albus RepID=UPI0003B5EF0F rbh
Putative sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:EFL27878.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
xylose isomerase domain-containing protein
SCNpilot_cont_750_bf_scaffold_900_8
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6786..7553)
DNA (768bp) protein (256aa)
short-chain dehydrogenase n=1 Tax=Humibacter albus RepID=UPI0003B70A0F rbh
Short chain dehydrogenase/reductase family oxidoreductase {ECO:0000313|EMBL:EFL27877.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_750_bf_scaffold_900_9
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7550..8236)
DNA (687bp) protein (229aa)
Transcriptional regulator, GntR family n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B749_9MICO
GntR family transcriptional regulator {ECO:0000313|EMBL:AJW80571.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
transcriptional regulator, GntR family
SCNpilot_cont_750_bf_scaffold_900_10
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8299..9261)
DNA (963bp) protein (321aa)
UDP-N-acetylglucosamine pyrophosphorylase n=1 Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8HGS7_ARTCA
UDP-N-acetylglucosamine pyrophosphorylase
UDP-N-acetylglucosamine pyrophosphorylase {ECO:0000313|EMBL:ACL41343.1}; TaxID=452863 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM; 12360 / NCIMB 13794 / A6).;"
SCNpilot_cont_750_bf_scaffold_900_11
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9258..10268)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI00036F8734 rbh
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:CDR02089.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
SCNpilot_cont_750_bf_scaffold_900_12
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10386..11324
DNA (939bp) protein (313aa)
Oxidoreductase n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NHW6_9ACTO
Oxidoreductase {ECO:0000313|EMBL:EGG47006.1}; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
Oxidoreductase domain protein
SCNpilot_cont_750_bf_scaffold_900_13
unknown

Not on your lists

11424..11675
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_900_14
Burkholderia sp. RPE67, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11731..12597
DNA (867bp) protein (289aa)
Putative ABC transporter permease protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MK79_9BURK rbh
Putative ABC transporter permease; K02050 NitT/TauT family transport system permease protein rbh
Putative ABC transporter permease protein {ECO:0000313|EMBL:BAO91431.1}; TaxID=758796 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE67.;"
SCNpilot_cont_750_bf_scaffold_900_15
Burkholderia grimmiae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12727..13836
DNA (1110bp) protein (370aa)
Twin-arginine translocation pathway signal n=1 Tax=Burkholderia sp. YI23 RepID=G8MKG1_9BURK rbh
Twin-arginine translocation pathway signal protein {ECO:0000313|EMBL:KDR32153.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;"
twin-arginine translocation pathway signal rbh
SCNpilot_cont_750_bf_scaffold_900_16
Burkholderia grimmiae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13878..14393
DNA (516bp) protein (172aa)
MaoC domain protein dehydratase n=1 Tax=Burkholderia sp. YI23 RepID=G8MKG2_9BURK
Dehydratase {ECO:0000313|EMBL:KDR32152.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;"
maoC; MaoC domain-containing protein dehydratase
SCNpilot_cont_750_bf_scaffold_900_17
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14390..15238
DNA (849bp) protein (283aa)
ABC transporter n=1 Tax=Burkholderia sp. YI23 RepID=G8MKG3_9BURK rbh
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein rbh
ABC transporter {ECO:0000313|EMBL:AET93585.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
SCNpilot_cont_750_bf_scaffold_900_18
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15235..16011
DNA (777bp) protein (259aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Burkholderia graminis C4D1M RepID=B1FUZ4_9BURK
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EDT12452.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
short-chain dehydrogenase/reductase sdr
SCNpilot_cont_750_bf_scaffold_900_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16008..17654
DNA (1647bp) protein (549aa)
coenzyme A transferase domain-containing protein; K01026 propionate CoA-transferase [EC:2.8.3.1]
Acetate CoA-transferase YdiF n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LQU4_BURGS
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_cont_750_bf_scaffold_900_20
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

17651..18904
DNA (1254bp) protein (418aa)
L-carnitine dehydratase/bile acid-inducible protein F (EC:2.8.3.16)
L-carnitine dehydratase/bile acid-inducible protein F id=14625352 bin=bin7_NC10_sister species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Tax=CSP1_6_Rokubacteria
SCNpilot_cont_750_bf_scaffold_900_21
unknown

Not on your lists

18950..19237
DNA (288bp) protein (96aa)

This feature has no annotations

Displaying 21 items

View Taxonomy