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SCNpilot_cont_750_bf_scaffold_908

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_908_1
Amycolatopsis benzoatilytica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..3184)
DNA (3183bp) protein (1061aa)
ORF16 n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDAA1
ORF16 {ECO:0000313|EMBL:ABN48424.1}; TaxID=346045 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis benzoatilytica.;"
TrwC relaxase
SCNpilot_cont_750_bf_scaffold_908_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3740..4009
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6N4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28928.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_908_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4115..4429
DNA (315bp) protein (105aa)
Rhodanese-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6N3_PSEUX
Rhodanese-like protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_908_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4477..5862
DNA (1386bp) protein (462aa)
Beta-lactamase domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6N2_PSEUX
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AEA28926.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_908_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5897..6691
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6N1_PSEUX rbh
hypothetical protein; K07090 rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA28925.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_908_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6739..7134
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6N0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28924.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_908_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7181..7411
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6M9_PSEUX
hypothetical protein; K08982 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28923.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_908_8
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7408..8868
DNA (1461bp) protein (487aa)
Multicopper oxidase type 3 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6M8_PSEUX rbh
multicopper oxidase type 3 rbh
Multicopper oxidase type 3 {ECO:0000313|EMBL:AEA28922.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_908_9
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8966..9556
DNA (591bp) protein (197aa)
Rhodanese-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6M7_PSEUX rbh
Rhodanese-like protein rbh
Rhodanese-like protein {ECO:0000313|EMBL:AEA28921.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_908_10
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9732..10298)
DNA (567bp) protein (189aa)
Putative resolvase n=1 Tax=Gordonia otitidis NBRC 100426 RepID=H5TI59_9ACTO
Resolvase domain protein {ECO:0000313|EMBL:AHJ58519.1}; TaxID=1156913 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
resolvase
SCNpilot_cont_750_bf_scaffold_908_11
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10519..11763)
DNA (1245bp) protein (415aa)
Major facilitator superfamily MFS_1 n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RN92_BLASD
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CCG02640.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCNpilot_cont_750_bf_scaffold_908_12
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11760..12215)
DNA (456bp) protein (152aa)
Transcriptional regulator, MerR family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ42_PSEUX
MerR family transcriptional regulator {ECO:0000313|EMBL:EWT05020.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
MerR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_908_13
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12299..12550
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Leifsonia rubra CMS 76R RepID=S7X8L7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPR75404.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
heavy metal transport/detoxification protein; K07213 copper chaperone
SCNpilot_cont_750_bf_scaffold_908_14
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12547..15006
DNA (2460bp) protein (820aa)
ATPase P n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B3B29C rbh
ATPase P {ECO:0000313|EMBL:EWT05018.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
heavy metal translocating P-type ATPase rbh
SCNpilot_cont_750_bf_scaffold_908_15
Anaplasma marginale, Anaplasma, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15072..15407
DNA (336bp) protein (112aa)
Thioredoxin n=1 Tax=Anaplasma marginale (strain St. Maries) RepID=Q5PBS9_ANAMM
trxA; thioredoxin; K03671 thioredoxin 1
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=320483 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Anaplasma.;" source="Anaplasma marginale (strain Florida).;"
SCNpilot_cont_750_bf_scaffold_908_16
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15522..15866
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Mycobacterium avium subsp. hominissuis TH135 RepID=U3TEB0_MYCAV
Uncharacterized protein {ECO:0000313|EMBL:KGI83017.1}; TaxID=414996 species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_908_17
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16353..17561
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037F73C4 rbh
Sugar (And other) transporter family protein {ECO:0000313|EMBL:EUA14200.1}; TaxID=1299327 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii 732.;"
MFS transporter rbh
SCNpilot_cont_750_bf_scaffold_908_18
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17558..18358
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RSK8_BLASD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCG01759.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
SCNpilot_cont_750_bf_scaffold_908_19
Mycobacterium arupense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18452..18889
DNA (438bp) protein (146aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB97453.1}; TaxID=342002 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium terrae complex.;" source="Mycobacterium arupense.;"
SCNpilot_cont_750_bf_scaffold_908_20
unknown

Not on your lists

19068..19286
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_908_21
unknown

Not on your lists

19283..19570
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_908_22
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19604..20611)
DNA (1008bp) protein (336aa)
Putative NUDIX hydrolase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VWP9_9ACTO
putative NUDIX hydrolase
Putative NUDIX hydrolase {ECO:0000313|EMBL:AGZ40056.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_750_bf_scaffold_908_23
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20629..21927)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YM13_NOCFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD60778.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
SCNpilot_cont_750_bf_scaffold_908_24
unknown

Not on your lists

comp(22449..22670)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_908_25
Mycobacterium canettii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23117..24397
DNA (1281bp) protein (427aa)
Transposase n=3 Tax=Mycobacterium canettii RepID=G0TFB6_MYCCP rbh
Transposase rbh
Transposase {ECO:0000313|EMBL:CCC45170.1}; TaxID=1048245 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium canettii (strain CIPT 140010059).;"
SCNpilot_cont_750_bf_scaffold_908_26
Mycobacterium intracellulare, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25303..25998)
DNA (696bp) protein (232aa)
Putative ParA n=1 Tax=Arthrobacter sp. Chr15 RepID=A6YFN9_9MICC
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:ETZ36168.1}; TaxID=1335421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium intracellulare MIN_052511_1280.;"
parA; putative partitioning protein, ATPase; K03496 chromosome partitioning protein
SCNpilot_cont_750_bf_scaffold_908_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26226..27644)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6R0_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28782.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_908_28
unknown

Not on your lists

comp(27779..27985)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_908_29
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28048..28866)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE361
Regulatory protein {ECO:0000313|EMBL:AJK57558.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
DNA-binding protein
SCNpilot_cont_750_bf_scaffold_908_30
Streptomyces pluripotens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28883..29374)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Micromonospora sp. (strain L5) RepID=E8SC96_MICSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIE36343.1}; TaxID=1355015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pluripotens.;"
Displaying items 1-30 of 36 in total

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