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SCNpilot_cont_750_bf_scaffold_554

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_554_1
unknown

Not on your lists

comp(3..77)
DNA (75bp) protein (25aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_554_2
Rheinheimera sp. A13L, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

568..1773
DNA (1206bp) protein (402aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=506534 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" source="Rheinheimera sp. A13L.;"
PAS domain S-box n=1 Tax=Rheinheimera sp. A13L RepID=F7NRA9_9GAMM
multi-component transcriptional regulator, winged helix family
SCNpilot_cont_750_bf_scaffold_554_3

Not on your lists

1876..2589
DNA (714bp) protein (238aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPS8_ROSS1
Uncharacterized protein {ECO:0000313|EMBL:KKL49480.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
two component transcriptional regulator; K07667 two-component system, OmpR family, KDP operon response regulator KdpE
SCNpilot_cont_750_bf_scaffold_554_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(2690..3472)
DNA (783bp) protein (261aa)
3-oxoacyl-(acyl-carrier-protein) reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5K3_9CHLR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFH80264.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
SCNpilot_cont_750_bf_scaffold_554_5
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(3535..5049)
DNA (1515bp) protein (505aa)
Microcystin LR degradation protein MlrC-like protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EIY6_9CHLR rbh
Microcystin LR degradation protein MlrC-like protein {ECO:0000313|EMBL:CCF84648.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
microcystin LR degradation protein MlrC-like protein rbh
SCNpilot_cont_750_bf_scaffold_554_6
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

5451..6317
DNA (867bp) protein (289aa)
molybdopterin dehydrogenase FAD-binding protein; K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] rbh
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8P9_SPHTD rbh
Molybdopterin dehydrogenase FAD-binding protein {ECO:0000313|EMBL:ACZ40192.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_750_bf_scaffold_554_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6423..6929
DNA (507bp) protein (169aa)
(2Fe-2S)-binding domain-containing protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
(2Fe-2S)-binding domain protein n=2 Tax=Rhodothermus marinus RepID=D0MGS2_RHOM4
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ACY49635.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
SCNpilot_cont_750_bf_scaffold_554_8
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

6926..9310
DNA (2385bp) protein (795aa)
carbon-monoxide dehydrogenase, large subunit; K03520 carbon-monoxide dehydrogenase large subunit [EC:1.2.99.2] id=14629465 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin8_Chloro organism_group=Chloroflexi rbh
carbon-monoxide dehydrogenase, large subunit; K03520 carbon-monoxide dehydrogenase large subunit [EC:1.2.99.2] rbh
Tax=CSP1_4_Chloroflexi
SCNpilot_cont_750_bf_scaffold_554_9
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

9316..10512
DNA (1197bp) protein (399aa)
hypothetical protein; K07402 xanthine dehydrogenase accessory factor id=14629464 bin=bin8_Chloro species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein; K07402 xanthine dehydrogenase accessory factor
Tax=RBG_16_Chloroflexi_63_12_curated
SCNpilot_cont_750_bf_scaffold_554_10
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

10586..11275
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FNY1_METHJ
hypothetical protein; K09138 hypothetical protein
Tax=RBG_13_Actinobacteria_63_9_curated
SCNpilot_cont_750_bf_scaffold_554_11
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11669..12526)
DNA (858bp) protein (286aa)
Putative stage 0 sporulation protein J n=1 Tax=Ruminococcus albus 8 RepID=E9S8R0_RUMAL
Putative stage 0 sporulation protein J {ECO:0000313|EMBL:EGC04338.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
transcriptional regulator; K03497 chromosome partitioning protein, ParB family
SCNpilot_cont_750_bf_scaffold_554_12
Gemella bergeri, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12513..13307)
DNA (795bp) protein (265aa)
Sporulation initiation inhibitor protein Soj n=1 Tax=Gemella bergeriae ATCC 700627 RepID=U2RZJ4_9BACL
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:ERK56012.1}; TaxID=1321820 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella bergeriae ATCC 700627.;"
Soj; chromosome partitioning ATPase; K03496 chromosome partitioning protein
SCNpilot_cont_750_bf_scaffold_554_13
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

13868..15763
DNA (1896bp) protein (632aa)
Transcriptional regulator, XRE family n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CJ09_THET1
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACZ43729.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_750_bf_scaffold_554_14
unknown

Not on your lists

16560..18332
DNA (1773bp) protein (591aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_554_15
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

comp(18449..19495)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI0003631F1F
AraC family transcriptional regulator
Tax=GWF2_Lentisphaerae_45_14_curated
SCNpilot_cont_750_bf_scaffold_554_16
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

19662..20489
DNA (828bp) protein (276aa)
Phytanoyl-CoA dioxygenase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TCC6_9CHLR rbh
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:EFH89943.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin
SCNpilot_cont_750_bf_scaffold_554_17
Chromohalobacter salexigens, Chromohalobacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20615..21736)
DNA (1122bp) protein (374aa)
iditol 2-dehydrogenase n=1 Tax=Cohnella laeviribosi RepID=UPI0003822111 rbh
alcohol dehydrogenase GroES-like protein rbh
Alcohol dehydrogenase GroES-like protein {ECO:0000313|EMBL:ABE57721.1}; TaxID=290398 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Chromohalobacter.;" source="Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB; 13768).;"
SCNpilot_cont_750_bf_scaffold_554_18
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(21763..24543)
DNA (2781bp) protein (927aa)
alpha-L-rhamnosidase; K05989 alpha-L-rhamnosidase [EC:3.2.1.40]
Alpha-L-rhamnosidase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U8E9_9CHLR rbh
Alpha-L-rhamnosidase {ECO:0000313|EMBL:EFH80160.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
SCNpilot_cont_750_bf_scaffold_554_19
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(24770..25552)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI00035F3F0E
DeoR family transcriptional regulator; K02081 DeoR family transcriptional regulator, aga operon transcriptional repressor
Putative DeoR family transcriptional regulator {ECO:0000313|EMBL:BAM01524.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SCNpilot_cont_750_bf_scaffold_554_20
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26369..27976
DNA (1608bp) protein (536aa)
Extracellular solute-binding protein family 1 n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KM50_CLOPH
Uncharacterized protein {ECO:0000313|EMBL:KKB11951.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
extracellular solute-binding protein
SCNpilot_cont_750_bf_scaffold_554_21
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28069..29013
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI00037B4BA3
Uncharacterized protein {ECO:0000313|EMBL:KKB11952.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
binding-protein-dependent transport systems inner membrane component
SCNpilot_cont_750_bf_scaffold_554_22
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29000..29875
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000371615B
Uncharacterized protein {ECO:0000313|EMBL:KKB11953.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
sugar ABC transporter permease
SCNpilot_cont_750_bf_scaffold_554_23
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

30019..33060
DNA (3042bp) protein (1014aa)
Alpha-L-rhamnosidase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6K6_9CHLR rbh
Alpha-L-rhamnosidase {ECO:0000313|EMBL:EFH80617.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
alpha-L-rhamnosidase rbh
SCNpilot_cont_750_bf_scaffold_554_24
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

33164..36049
DNA (2886bp) protein (962aa)
ramA; alpha-L-rhamnosidase; K05989 alpha-L-rhamnosidase [EC:3.2.1.40] rbh
Alpha-L-rhamnosidase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9L5_CALAS rbh
Alpha-L-rhamnosidase {ECO:0000313|EMBL:BAM01953.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SCNpilot_cont_750_bf_scaffold_554_25
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

36264..37232
DNA (969bp) protein (323aa)
Aldo/keto reductase n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6CVW0_PAESJ
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ACS99823.1}; Flags: Precursor;; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
SCNpilot_cont_750_bf_scaffold_554_26
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

37286..38329
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B3F68F
oxidoreductase domain-containing protein
Tax=CG_Arma_01
SCNpilot_cont_750_bf_scaffold_554_27
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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38375..38746
DNA (372bp) protein (124aa)
Mll6572 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q988W0_RHILO
hypothetical protein
Tax=BJP_IG2069_Desfulfarculales_53_13
Displaying 27 items

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