ggKbase home page

SCNpilot_cont_750_bf_scaffold_1628

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1628_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1718
DNA (1716bp) protein (572aa)
UvrABC system protein A n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVF9_9RHIZ
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
SCNpilot_cont_750_bf_scaffold_1628_2
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2101..2931)
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YF56_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH09627.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1628_3
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2924..4231)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HU94_PARL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS63477.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_750_bf_scaffold_1628_4
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4460..5122)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3WZK4_RHIFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL49060.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_750_bf_scaffold_1628_5
unknown

Not on your lists

comp(5232..5423)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1628_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5547..6506
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTG8_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55946.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_750_bf_scaffold_1628_7

Not on your lists

6672..7508
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=L7Y0H7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGD93231.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1628_8
Streptococcus equi, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7561..7809)
DNA (249bp) protein (83aa)
Fibronectin-binding protein FbpZ.2 n=1 Tax=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) RepID=B4U1K4_STREM
fbpZ.2; fibronectin-binding protein FbpZ.2
Fibronectin-binding protein FbpZ.2 {ECO:0000313|EMBL:ACG61871.1}; TaxID=552526 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus equi subsp. zooepidemicus (strain MGCS10565).;"
SCNpilot_cont_750_bf_scaffold_1628_9
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8187..10463
DNA (2277bp) protein (759aa)
Phage/plasmid primase, P4 family n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I866_RHOVT rbh
phage/plasmid primase, P4 family rbh
Phage/plasmid primase, P4 family {ECO:0000313|EMBL:ADP71992.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
SCNpilot_cont_750_bf_scaffold_1628_10
unknown

Not on your lists

10464..10610
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1628_11
Thioclava sp. 13D2W-2, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10737..11261
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=Q8U5K9_AGRT5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFE34902.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13D2W-2.;"
SCNpilot_cont_750_bf_scaffold_1628_12
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11248..11697
DNA (450bp) protein (150aa)
Phage terminase GpA n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WW77_9BRAD
Putative phage terminase large subunit {ECO:0000313|EMBL:GAM00012.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
terminase GpA
SCNpilot_cont_750_bf_scaffold_1628_13
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11759..11899
DNA (141bp) protein (47aa)
Putative transposase for insertion sequence IS408 n=1 Tax=Nitratireductor indicus C115 RepID=K2NPM1_9RHIZ
Putative transposase for insertion sequence IS408 {ECO:0000313|EMBL:EKF39799.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
putative transposase for insertion sequence IS408
Displaying 13 items

View Taxonomy