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SCNpilot_cont_750_bf_scaffold_222

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Displaying items 1-30 of 309 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_222_1
unknown

Not on your lists

3..89
DNA (87bp) protein (29aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_222_2
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

595..1176
DNA (582bp) protein (194aa)
Site-specific recombinase, DNA invertase Pin n=1 Tax=Rhizobium sp. CF080 RepID=J3AU77_9RHIZ
Resolvase domain-containing protein {ECO:0000313|EMBL:EUB96497.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_222_3
unknown

Not on your lists

1857..2174
DNA (318bp) protein (106aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_222_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2500..3837
DNA (1338bp) protein (446aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Putative DNA modification methylase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWU1_9SPHN
prophage LambdaMc01, DNA methyltransferase
SCNpilot_cont_750_bf_scaffold_222_5
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3827..4222
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4ACV1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAQ96142.1}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregibacter litoralis KT71.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_222_6
Candidatus Hamiltonella defensa, Candidatus Hamiltonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4212..5669
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003661C0C
Putative phage terminase-like protein {ECO:0000313|EMBL:CED78665.1}; TaxID=672795 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; aphid secondary symbionts; Candidatus Hamiltonella.;" source="Candidatus Hamiltonella defensa (Bemisia tabaci).;"
terminase-like protein rbh
SCNpilot_cont_750_bf_scaffold_222_7
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6242..6580)
DNA (339bp) protein (113aa)
Transcriptional regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NYV8_AZOS1
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAI76365.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCNpilot_cont_750_bf_scaffold_222_8
unknown

Not on your lists

6702..7499
DNA (798bp) protein (266aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_222_9
R_WOR_1_46_20, WOR-1, Bacteria

Not on your lists

7501..8778
DNA (1278bp) protein (426aa)
Beta-lactamase domain protein n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7KQV3_METC4 rbh
beta-lactamase rbh
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
SCNpilot_cont_750_bf_scaffold_222_10
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9166..9633
DNA (468bp) protein (156aa)
UPI0003CFBAD7 related cluster n=1 Tax=unknown RepID=UPI0003CFBAD7
Uncharacterized protein {ECO:0000313|EMBL:ESY90844.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
transcriptional regulator; K07497 putative transposase
SCNpilot_cont_750_bf_scaffold_222_11
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9829..10278
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI000381B32E
DNA methylase N-4 {ECO:0000313|EMBL:KKC23980.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
DNA methylase N-4/N-6 domain-containing protein
SCNpilot_cont_750_bf_scaffold_222_12
unknown

Not on your lists

comp(10259..10435)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_222_13
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10779..13055)
DNA (2277bp) protein (759aa)
large subunit of N,N-dimethylformamidase; K03418 N,N-dimethylformamidase [EC:3.5.1.56]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003802A27
Uncharacterized protein {ECO:0000313|EMBL:ETX01815.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
SCNpilot_cont_750_bf_scaffold_222_14
unknown

Not on your lists

comp(13052..13354)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_222_15
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(13379..15067)
DNA (1689bp) protein (563aa)
thiamine pyrophosphate protein central region; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] rbh
Thiamine pyrophosphate protein central region n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2R4_SPHTD rbh
Tax=RBG_16_Bathyarchaeota_57_9_curated
SCNpilot_cont_750_bf_scaffold_222_16
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15068..16723)
DNA (1656bp) protein (552aa)
ABC transporter ATP-binding protein n=1 Tax=Halomonas sp. KM-1 RepID=UPI00028A1E48
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EDM70710.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. AzwK-3b.;"
ABC transporter-like protein; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_222_17
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16720..17562)
DNA (843bp) protein (281aa)
ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F6B428
ABC transporter permease {ECO:0000313|EMBL:KFI25657.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter missouriensis.;"
appC; ABC transporter permease
SCNpilot_cont_750_bf_scaffold_222_18
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17559..18536)
DNA (978bp) protein (326aa)
ABC transporter permease n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B641DF
dppB; ABC transporter permease
DppB protein {ECO:0000313|EMBL:BAQ44938.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
SCNpilot_cont_750_bf_scaffold_222_19
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18544..20163)
DNA (1620bp) protein (540aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Novispirillum itersonii RepID=UPI0003603E38 rbh
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJB95514.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
dppA; dipeptide ABC transporter, substrate-binding component rbh
SCNpilot_cont_750_bf_scaffold_222_20
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

20236..21750
DNA (1515bp) protein (505aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI0003717106
GntR family transcriptional regulator; K00375 GntR family transcriptional regulator / MocR family aminotransferase
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABG03115.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
SCNpilot_cont_750_bf_scaffold_222_21
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(21766..22785)
DNA (1020bp) protein (340aa)
oxidoreductase; K00010 myo-inositol 2-dehydrogenase [EC:1.1.1.18]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036F662C
Oxidoreductase domain protein {ECO:0000313|EMBL:ADY58677.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
SCNpilot_cont_750_bf_scaffold_222_22
unknown

Not on your lists

comp(22915..23277)
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_222_23
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(23284..24096)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037F9685
ABC transporter permease; K02026 multiple sugar transport system permease protein
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEJ18776.1}; Flags: Precursor;; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
SCNpilot_cont_750_bf_scaffold_222_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24102..25067)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036C2DEB
sugar ABC transporter permease
Tax=GWC2_Gemmatimonadetes_71_10_curated
SCNpilot_cont_750_bf_scaffold_222_25
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25129..26376)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000362E427
Extracellular substrate-binding protein, family 1; K02027 multiple sugar transport system substrate-binding protein
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EGL15351.1}; TaxID=944559 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF7.;"
SCNpilot_cont_750_bf_scaffold_222_26
bacterium YEK0313, Bacteria

Not on your lists

comp(26471..27547)
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036B1081
Trehalose import ATP-binding protein SugC {ECO:0000313|EMBL:CEJ15206.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter ATP-binding protein; K10112 maltose/maltodextrin transport system ATP-binding protein
SCNpilot_cont_750_bf_scaffold_222_27
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27576..28367)
DNA (792bp) protein (264aa)
hpaI; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; K02510 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [EC:4.1.2.-]
UPI0003D620AD related cluster n=1 Tax=unknown RepID=UPI0003D620AD
4-hydroxy-2-oxo-heptane-1,7-dioate aldolase {ECO:0000313|EMBL:KGD99745.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
SCNpilot_cont_750_bf_scaffold_222_28
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28463..29650)
DNA (1188bp) protein (396aa)
Putative amidohydrolase {ECO:0000313|EMBL:AKH98819.1}; EC=3.5.2.3 {ECO:0000313|EMBL:AKH98819.1};; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
dihydroorotase; K01465 dihydroorotase [EC:3.5.2.3] rbh
Dihydroorotase n=2 Tax=Ketogulonicigenium vulgare RepID=E3EXW4_KETVY rbh
SCNpilot_cont_750_bf_scaffold_222_29
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29644..30327)
DNA (684bp) protein (228aa)
short-chain dehydrogenase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037A65DB
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
SCNpilot_cont_750_bf_scaffold_222_30
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30324..31226)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI000373C5BF
SMP-30/Gluconolaconase/LRE-like region {ECO:0000313|EMBL:KCB41249.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
senescence marker protein-30
Displaying items 1-30 of 309 in total

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