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SCNpilot_cont_750_bf_scaffold_98

Search features with annotation key words

Displaying items 1-30 of 219 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_98_1
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56..808)
DNA (753bp) protein (251aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IHB0_XANP2
electron transfer flavoprotein subunit alpha/beta; K03521 electron transfer flavoprotein beta subunit
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:ABS67403.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_750_bf_scaffold_98_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(881..1453)
DNA (573bp) protein (191aa)
Cob(I)alamin adenosyltransferase PduO n=1 Tax=Rhodovulum sp. PH10 RepID=J6UHB0_9RHOB
Cob(I)alamin adenosyltransferase PduO {ECO:0000313|EMBL:EJW13351.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_98_3
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1462..1653)
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003802C09
Uncharacterized protein {ECO:0000313|EMBL:ETR77117.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_98_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1812..3719
DNA (1908bp) protein (636aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LFG3_9RHOB rbh
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:EJW11793.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
family 2 glycosyl transferase
SCNpilot_cont_750_bf_scaffold_98_5
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3710..4297)
DNA (588bp) protein (196aa)
SCO1/SenC/PrrC protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2W274_9BRAD
SCO1/SenC/PrrC protein {ECO:0000313|EMBL:EJN12717.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
cytochrome C oxidase assembly factor transmembrane protein; K07152
SCNpilot_cont_750_bf_scaffold_98_6
unknown

Not on your lists

comp(4331..4606)
DNA (276bp) protein (92aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_98_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4716..5603
DNA (888bp) protein (296aa)
Polysaccharide deacetylase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q135R9_RHOPS
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ABE40170.1}; Flags: Precursor;; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_750_bf_scaffold_98_8
Pseudomonas sp. C5pp, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5656..6591)
DNA (936bp) protein (312aa)
LysR family transcriptional regulator n=1 Tax=Burkholderia sp. YI23 RepID=G8MM72_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:KIC79554.1}; TaxID=1586081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. C5pp.;"
lysR; LysR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_98_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6775..8280
DNA (1506bp) protein (502aa)
Glutamine synthetase n=1 Tax=Bacillus sp. 1NLA3E RepID=N0AYV9_9BACI
glutamine synthetase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_750_bf_scaffold_98_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8299..9651
DNA (1353bp) protein (451aa)
Rieske (2Fe-2S) domain-containing protein n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6D891_BACAZ rbh
Rieske (2Fe-2S) domain-containing protein rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_750_bf_scaffold_98_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9653..10252
DNA (600bp) protein (200aa)
Aromatic-ring-hydroxylating dioxygenase subunit beta n=1 Tax=Bacillus sp. 1NLA3E RepID=N0B037_9BACI
aromatic-ring-hydroxylating dioxygenase subunit beta
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_750_bf_scaffold_98_12
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10269..11270)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031E8EDD
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCNpilot_cont_750_bf_scaffold_98_13
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11459..13789
DNA (2331bp) protein (777aa)
Competence protein ComEA helix-hairpin-helix repeat region n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQQ3_AFIFE rbh
Competence protein ComEA helix-hairpin-helix repeat region {ECO:0000313|EMBL:EKS30739.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
RNA-binding S1 domain-containing protein; K06959 uncharacterized protein
SCNpilot_cont_750_bf_scaffold_98_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14285..14650
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DHR9_BRAJP
Photosystem reaction center subunit H {ECO:0000313|EMBL:KIZ44368.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_98_15
unknown

Not on your lists

comp(14826..15056)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_98_16
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15127..15807)
DNA (681bp) protein (227aa)
GntR family transcriptional regulator n=1 Tax=Amycolatopsis nigrescens RepID=UPI000373D101
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CDP51663.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
GntR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_98_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15959..16810)
DNA (852bp) protein (284aa)
Polysaccharide deacetylase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11K76_MESSB rbh
polysaccharide deacetylase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_750_bf_scaffold_98_18
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16997..17977
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW02_9RHIZ
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM31575.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
uptake protein
SCNpilot_cont_750_bf_scaffold_98_19
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18007..18468
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QWG0_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
SCNpilot_cont_750_bf_scaffold_98_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18484..18831
DNA (348bp) protein (116aa)
Cupin 2 domain-containing protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XTJ7_PARAH
Uncharacterized protein {ECO:0000313|EMBL:KFC75875.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cupin 2 domain-containing protein
SCNpilot_cont_750_bf_scaffold_98_21
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18856..19962)
DNA (1107bp) protein (369aa)
2'-deoxycytidine 5'-triphosphate deaminase {ECO:0000313|EMBL:ETR77258.1}; EC=3.5.4.13 {ECO:0000313|EMBL:ETR77258.1};; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
dcd; 2'-deoxycytidine 5'-triphosphate deaminase; K01494 dCTP deaminase [EC:3.5.4.13]
2'-deoxycytidine 5'-triphosphate deaminase n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GGK2_9BRAD
SCNpilot_cont_750_bf_scaffold_98_22
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20220..21455
DNA (1236bp) protein (412aa)
metZ; O-succinylhomoserine sulfhydrylase MetZ (EC:2.5.1.-); K10764 O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
O-succinylhomoserine sulfhydrylase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P0X5_9BRAD
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:EKS33315.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_750_bf_scaffold_98_23
unknown

Not on your lists

21524..21832
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_98_24
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21833..23080)
DNA (1248bp) protein (416aa)
Two-component hybrid sensor and regulator n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QJ19_9BRAD
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:EGP08803.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
histidine kinase
SCNpilot_cont_750_bf_scaffold_98_25
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23149..23994)
DNA (846bp) protein (282aa)
Putative Glutamyl-tRNA synthetase, class Ic {ECO:0000313|EMBL:CCD90548.1}; EC=6.1.1.17 {ECO:0000313|EMBL:CCD90548.1};; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
glutamyl-tRNA Synthetase; K01894 glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
Putative Glutamyl-tRNA synthetase, class Ic n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0S8M1_9BRAD
SCNpilot_cont_750_bf_scaffold_98_26
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24093..24770
DNA (678bp) protein (226aa)
HhH-GPD family protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B189_9RHIZ
HhH-GPD family protein
HhH-GPD family protein {ECO:0000313|EMBL:AGK56713.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_750_bf_scaffold_98_27
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24763..25446
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J5PST2_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EJW12977.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
phospholipase/carboxylesterase; K06999 phospholipase/carboxylesterase
SCNpilot_cont_750_bf_scaffold_98_28
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25463..25783)
DNA (321bp) protein (107aa)
Amicyanin protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0STK1_9BRAD
Amicyanin protein {ECO:0000313|EMBL:CCE11459.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_98_29
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25807..26328)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IFB9_METNO
hypothetical protein; K08995 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ACL57654.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_750_bf_scaffold_98_30
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26424..27107)
DNA (684bp) protein (228aa)
RNA polymerase sigma factor n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TYC3_9BRAD
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Displaying items 1-30 of 219 in total

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