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SCNpilot_cont_750_bf_scaffold_216

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Displaying items 1-30 of 187 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_216_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(255..1574)
DNA (1320bp) protein (440aa)
Amidase id=4757273 bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium sp. CCGE-LA001 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
amidase rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_750_bf_scaffold_216_2
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1818..3734)
DNA (1917bp) protein (639aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D1Q9_BRAJP rbh
hypothetical protein rbh
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KGT77044.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
SCNpilot_cont_750_bf_scaffold_216_3
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3731..4399)
DNA (669bp) protein (223aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI0002F7B26D rbh
Membrane protein {ECO:0000313|EMBL:ETR77900.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_216_4
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4552..5691)
DNA (1140bp) protein (380aa)
C4-dicarboxylate ABC transporter n=1 Tax=Bradyrhizobium japonicum RepID=UPI000366A376 rbh
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:ETR77899.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_216_5
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5990..7645)
DNA (1656bp) protein (552aa)
L-lactate transport n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HTP4_9RHIZ rbh
L-lactate transport {ECO:0000313|EMBL:EJN05278.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
glcA; glycolate permease GlcA; K03303 lactate transporter, LctP family
SCNpilot_cont_750_bf_scaffold_216_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7970..9733
DNA (1764bp) protein (588aa)
ABC transporter-like n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20X83_RHOPB
ABC transporter-like protein; K02471 putative ATP-binding cassette transporter
ABC transporter-like {ECO:0000313|EMBL:ABD90253.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_750_bf_scaffold_216_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9752..10222)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6J3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS37116.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
HPP family protein
SCNpilot_cont_750_bf_scaffold_216_8
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10293..11252)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ECI2_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ33876.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_750_bf_scaffold_216_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11604..12200
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRQ8_NITHX
hypothetical protein; K09965 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61089.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_750_bf_scaffold_216_10
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12262..13617)
DNA (1356bp) protein (452aa)
Glycolate oxidase iron-sulfur subunit n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J061_POLGS rbh
glycolate oxidase iron-sulfur subunit; K11473 glycolate oxidase iron-sulfur subunit rbh
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_750_bf_scaffold_216_11
Ewingella americana, Ewingella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13707..14228
DNA (522bp) protein (174aa)
Putative membrane-associated protein n=1 Tax=Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65) RepID=H2IVX9_RAHAC
Putative membrane protein {ECO:0000313|EMBL:KFC78284.1}; TaxID=910964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Ewingella.;" source="Ewingella americana ATCC 33852.;"
putative membrane-associated protein
SCNpilot_cont_750_bf_scaffold_216_12
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14243..15457)
DNA (1215bp) protein (405aa)
FAD linked oxidase-like protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MEY1_9RHIZ
FAD linked oxidase-like protein {ECO:0000313|EMBL:EKF20651.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
FAD linked oxidase; K11472 glycolate oxidase FAD binding subunit rbh
SCNpilot_cont_750_bf_scaffold_216_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15461..16954)
DNA (1494bp) protein (498aa)
FAD linked oxidase-like protein; K00104 glycolate oxidase [EC:1.1.3.15]
FAD linked oxidase-like n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZ25_RHOP2
FAD linked oxidase-like {ECO:0000313|EMBL:ABD06535.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_750_bf_scaffold_216_14
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17052..17435
DNA (384bp) protein (128aa)
Cytochrome C n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJ82_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig174, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49239.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
cytochrome C
SCNpilot_cont_750_bf_scaffold_216_15
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17505..17999
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DD7FB0
CoA-binding domain-containing protein; K09181 hypothetical protein
Acyl-CoA synthetase (NDP forming) {ECO:0000313|EMBL:EIM27768.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
SCNpilot_cont_750_bf_scaffold_216_16
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18003..18665)
DNA (663bp) protein (221aa)
Putative transcriptional regulator n=1 Tax=Rhodovulum sp. PH10 RepID=J6UI64_9RHOB
Putative transcriptional regulator {ECO:0000313|EMBL:EJW13264.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
putative transcriptional regulator, TetR family
SCNpilot_cont_750_bf_scaffold_216_17
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18759..20441)
DNA (1683bp) protein (561aa)
thiamine pyrophosphate protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] rbh
thiamine pyrophosphate protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FDFEDF
Thiamine pyrophosphate-binding protein {ECO:0000313|EMBL:KFG70142.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
SCNpilot_cont_750_bf_scaffold_216_18
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20577..20984)
DNA (408bp) protein (136aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=Acidovorax sp. CF316 RepID=J1EB41_9BURK
endoribonuclease L-PSP
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCNpilot_cont_750_bf_scaffold_216_19
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21028..21825)
DNA (798bp) protein (266aa)
Putative aliphatic sulfonates transport permease protein ssuC n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7M7_HYPSM rbh
aliphatic sulfonates transport permease ssuC rbh
Putative aliphatic sulfonates transport permease protein ssuC {ECO:0000313|EMBL:CCB63500.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_750_bf_scaffold_216_20
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21863..22945)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7M4_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB63497.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_750_bf_scaffold_216_21
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22964..24376)
DNA (1413bp) protein (471aa)
cytosine deaminase; K12960 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
Amidohydrolase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1RYJ3_9BURK rbh
Amidohydrolase {ECO:0000313|EMBL:EHP44684.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
SCNpilot_cont_750_bf_scaffold_216_22
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24376..25179)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7M6_HYPSM rbh
hypothetical protein; K02049 NitT/TauT family transport system ATP-binding protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCB63499.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_cont_750_bf_scaffold_216_23
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25270..25854
DNA (585bp) protein (195aa)
Transcriptional regulator n=1 Tax=Chamaesiphon minutus PCC 6605 RepID=K9UBU7_9CHRO
Transcriptional regulator {ECO:0000313|EMBL:KDP88382.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
transcriptional regulator
SCNpilot_cont_750_bf_scaffold_216_24
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25855..27669)
DNA (1815bp) protein (605aa)
Putative glucoamylase or related glycosyl hydrolase protein n=1 Tax=Ralstonia solanacearum K60-1 RepID=H5W8J8_RALSL
Putative glucoamylase or related glycosyl hydrolase protein {ECO:0000313|EMBL:CCF96119.1}; TaxID=1091042 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum K60-1.;"
putative glycoside hydrolase, family 15
SCNpilot_cont_750_bf_scaffold_216_25
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27666..28709)
DNA (1044bp) protein (348aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488) RepID=D7AYV6_NOCDD
alcohol dehydrogenase GroES domain-containing protein
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:ADH68118.1}; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
SCNpilot_cont_750_bf_scaffold_216_26
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28850..30064
DNA (1215bp) protein (405aa)
Major facilitator superfamily n=1 Tax=Rhodovulum sp. PH10 RepID=J5PU24_9RHOB rbh
Major facilitator superfamily {ECO:0000313|EMBL:EJW13237.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
major facilitator transporter
SCNpilot_cont_750_bf_scaffold_216_27
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30163..31281
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T3S8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE01105.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
twin-arginine translocation pathway signal protein
SCNpilot_cont_750_bf_scaffold_216_28
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31342..31956)
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CAJ6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ETR78481.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_216_29
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31953..33173)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D8T3_BRAJP
hypothetical protein; K07234 uncharacterized protein involved in response to NO
Uncharacterized protein {ECO:0000313|EMBL:BAL07610.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_750_bf_scaffold_216_30
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33264..33578)
DNA (315bp) protein (105aa)
Branched-chain amino acid transport n=1 Tax=Rhodovulum sp. PH10 RepID=J6UFI4_9RHOB
Branched-chain amino acid transport {ECO:0000313|EMBL:EJW12491.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
branched-chain amino acid transport
Displaying items 1-30 of 187 in total

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