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SCNpilot_cont_750_bf_scaffold_324

Search features with annotation key words

Displaying items 1-30 of 79 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_324_1
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(245..1189)
DNA (945bp) protein (315aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881, ECO:0000313|EMBL:CDK99952.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
thioredoxin reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase, FAD/NAD(P)-binding n=2 Tax=Magnetospirillum gryphiswaldense RepID=V6F3I2_9PROT
SCNpilot_cont_750_bf_scaffold_324_2
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(1277..2713)
DNA (1437bp) protein (479aa)
Amidohydrolase family n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q095I4_STIAD rbh
Uncharacterized protein {ECO:0000313|EMBL:KIJ77837.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
amidohydrolase family rbh
SCNpilot_cont_750_bf_scaffold_324_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2743..3357)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y509_RAMTT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_750_bf_scaffold_324_4
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3360..3755)
DNA (396bp) protein (132aa)
DoxX family protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVS1_9BACT
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCNpilot_cont_750_bf_scaffold_324_5
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3768..5111)
DNA (1344bp) protein (448aa)
3-hydroxyphenylpropionic acid n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TT65_TISMK
pcaK; 3-hydroxyphenylpropionic acid
3-hydroxyphenylpropionic acid {ECO:0000313|EMBL:AFK55953.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_750_bf_scaffold_324_6
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5301..6833)
DNA (1533bp) protein (511aa)
4-hydroxyphenylacetate 3-monooxygenase {ECO:0000313|EMBL:CDY79056.1}; EC=1.14.14.9 {ECO:0000313|EMBL:CDY79056.1};; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
4-hydroxyphenylacetate 3-hydroxylase n=2 Tax=Burkholderia RepID=I5D0G6_9BURK rbh
tcpA; 2,4,6-trichlorophenol monooxygenase rbh
SCNpilot_cont_750_bf_scaffold_324_7
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6876..7445)
DNA (570bp) protein (190aa)
rutF; NAD(P)H-flavin reductase RutF (EC:1.5.1.29); K09024 flavin reductase [EC:1.5.1.-]
Flavin reductase-like, FMN-binding protein n=2 Tax=Burkholderia RepID=I5D0G7_9BURK
NAD(FAD)-dependent dehydrogenase {ECO:0000313|EMBL:KDR42729.1}; Predicted flavin reductase RutF in novel pyrimidine catabolism pathway {ECO:0000313|EMBL:CDY79057.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
SCNpilot_cont_750_bf_scaffold_324_8
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7550..8506
DNA (957bp) protein (319aa)
Uncharacterized protein n=2 Tax=Ralstonia pickettii RepID=U3QP93_RALPI rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:BAL41657.1}; TaxID=329 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (Burkholderia pickettii).;"
regulatory protein LysR rbh
SCNpilot_cont_750_bf_scaffold_324_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8735..9388
DNA (654bp) protein (218aa)
Carboxymuconolactone decarboxylase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTA4_ACIC1
carboxymuconolactone decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_cont_750_bf_scaffold_324_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9995..10840
DNA (846bp) protein (282aa)
rrm1; RNA methyltransferase TrmH group 3; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
RNA methyltransferase, TrmH family, group 3 n=2 Tax=Rhodopseudomonas palustris RepID=B3QDZ7_RHOPT
Putative rRNA methylase {ECO:0000313|EMBL:CAE28805.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_cont_750_bf_scaffold_324_11
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10844..11860)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3BPY5_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EUB99671.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
putative Bug-like extra-cytoplasmic solute receptor, TTT-family
SCNpilot_cont_750_bf_scaffold_324_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11842..12843)
DNA (1002bp) protein (334aa)
Twin-arginine translocation pathway signal n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVT2_RHOP2
twin-arginine translocation pathway signal
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:ABD07678.1}; Flags: Precursor;; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_750_bf_scaffold_324_13
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12949..13899
DNA (951bp) protein (317aa)
Transcriptional regulatory protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6L8S5_9RHOB rbh
Transcriptional regulatory protein {ECO:0000313|EMBL:EJW09888.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
LysR family regulatory protein
SCNpilot_cont_750_bf_scaffold_324_14
unknown

Not on your lists

comp(13896..14507)
DNA (612bp) protein (204aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_324_15
unknown

Not on your lists

comp(14554..14955)
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_324_16
unknown

Not on your lists

15111..15449
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_324_17
unknown

Not on your lists

comp(15631..16239)
DNA (609bp) protein (203aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_324_18
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16544..16747
DNA (204bp) protein (68aa)
cold-shock protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F1F902
Cold-shock protein {ECO:0000313|EMBL:ETR75047.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
cold-shock protein, DNA-binding; K03704 cold shock protein (beta-ribbon, CspA family)
SCNpilot_cont_750_bf_scaffold_324_19
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17009..17491)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJK2_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS27730.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
lipoprotein
SCNpilot_cont_750_bf_scaffold_324_20
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17629..18159)
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q131U4_RHOPS
Bradyrhizobium elkanii strain UASWS1015 Contig185, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44938.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_324_21
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18286..20373)
DNA (2088bp) protein (696aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCM6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36098.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
outer membrane hemin/siderophore receptor protein; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_750_bf_scaffold_324_22
unknown

Not on your lists

comp(20908..21198)
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_324_23
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21389..21733)
DNA (345bp) protein (115aa)
Periplasmic divalent cation tolerance protein cutA n=1 Tax=Rhodovulum sp. PH10 RepID=J6JG13_9RHOB
Periplasmic divalent cation tolerance protein cutA {ECO:0000313|EMBL:EJW13615.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
CutA1 divalent ion tolerance protein; K03926 periplasmic divalent cation tolerance protein
SCNpilot_cont_750_bf_scaffold_324_24
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21749..22522
DNA (774bp) protein (258aa)
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23); K00858 NAD+ kinase [EC:2.7.1.23]
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SSZ5_NITWN
SCNpilot_cont_750_bf_scaffold_324_25
bacterium YEK0313, Bacteria

Not on your lists

22637..23197
DNA (561bp) protein (187aa)
Chemotaxis protein CheYIII n=1 Tax=Rhodovulum sp. PH10 RepID=J6LLU1_9RHOB rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:CEJ12686.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
two-component response regulator
SCNpilot_cont_750_bf_scaffold_324_26
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23222..23797
DNA (576bp) protein (192aa)
Hpt domain-containing protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QQ60_9BRAD
Hpt domain-containing protein {ECO:0000313|EMBL:EGP06837.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Hpt protein
SCNpilot_cont_750_bf_scaffold_324_27
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23849..25048)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMS0_NITHX
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43392.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_324_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25158..26162)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QE22_RHOPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF02367.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_cont_750_bf_scaffold_324_29
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26279..26755
DNA (477bp) protein (159aa)
Acyl dehydratase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW77_9RHIZ
Acyl dehydratase {ECO:0000313|EMBL:EIM28219.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
dehydratase
SCNpilot_cont_750_bf_scaffold_324_30
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26755..27627
DNA (873bp) protein (291aa)
HpcH/HpaI aldolase; K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34]
Hydroxymethylglutaryl-CoA lyase n=1 Tax=Rhodovulum sp. PH10 RepID=J6IZ34_9RHOB rbh
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:EJW10265.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
Displaying items 1-30 of 79 in total

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