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SCNpilot_cont_750_bf_scaffold_1069

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1069_1
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..894)
DNA (894bp) protein (298aa)
L-asparaginase II n=1 Tax=Microbacterium sp. TS-1 RepID=U2YQZ6_9MICO
L-asparaginase II {ECO:0000313|EMBL:KJL41272.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ansA; L-asparaginase II
SCNpilot_cont_750_bf_scaffold_1069_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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967..1437
DNA (471bp) protein (157aa)
Redox protein, regulator of disulfide bondformation n=1 Tax=Microbacterium sp. TS-1 RepID=U2YYC2_9MICO
OsmC-like protein {ECO:0000313|EMBL:KJL41273.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
redox protein, regulator of disulfide bond formation
SCNpilot_cont_750_bf_scaffold_1069_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1472..2302)
DNA (831bp) protein (277aa)
plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] rbh
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Microbacterium yannicii RepID=UPI000373660C rbh
Bifunctional protein Aas {ECO:0000313|EMBL:KJL41274.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_750_bf_scaffold_1069_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2381..3322
DNA (942bp) protein (314aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
fkpA; peptidylprolyl isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8]
hypothetical protein n=1 Tax=Microbacterium RepID=UPI000376DDB6 rbh
SCNpilot_cont_750_bf_scaffold_1069_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3900..4352
DNA (453bp) protein (151aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacteriu
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase; K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000373BA84
SCNpilot_cont_750_bf_scaffold_1069_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4426..5091)
DNA (666bp) protein (222aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00276926};; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
UDP-N-acetylmuramyl tripeptide synthase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
UDP-N-acetylmuramyl peptide synthase n=1 Tax=Microbacterium yannicii RepID=UPI00037D0282
SCNpilot_cont_750_bf_scaffold_1069_7
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5058..5987)
DNA (930bp) protein (310aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00276926};; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
UDP-N-acetylmuramyl tripeptide synthase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
UDP-N-acetylmuramyl-tripeptide synthetase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAC0_MICTS
SCNpilot_cont_750_bf_scaffold_1069_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6098..7504
DNA (1407bp) protein (469aa)
Zinc metalloprotease Rip1 {ECO:0000313|EMBL:KJL41278.1}; EC=3.4.24.- {ECO:0000313|EMBL:KJL41278.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
metalloprotease; K01417 [EC:3.4.24.-] rbh
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002EC8914
SCNpilot_cont_750_bf_scaffold_1069_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7537..9423)
DNA (1887bp) protein (629aa)
Anthranilate synthase component 1 {ECO:0000313|EMBL:KJL41279.1}; EC=4.1.3.27 {ECO:0000313|EMBL:KJL41279.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
anthranilate/para-aminobenzoate synthase component I; K13063 phenazine biosynthesis protein phzE [EC:2.6.1.86] rbh
anthranilate synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BC307 rbh
SCNpilot_cont_750_bf_scaffold_1069_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9641..10792
DNA (1152bp) protein (384aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ispG; hypothetical protein; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Microbacterium barkeri RepID=UPI000362C636 rbh
SCNpilot_cont_750_bf_scaffold_1069_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10817..12073
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003758878 rbh
Inner membrane protein YdcO {ECO:0000313|EMBL:KJL41281.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein; K05782 benzoate membrane transport protein rbh
SCNpilot_cont_750_bf_scaffold_1069_12
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12092..12760)
DNA (669bp) protein (223aa)
Pyroglutamyl-peptidase I {ECO:0000256|SAAS:SAAS00130640}; EC=3.4.19.3 {ECO:0000256|SAAS:SAAS00130640};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
pyrrolidone-carboxylate peptidase; K01304 pyroglutamyl-peptidase [EC:3.4.19.3]
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI00037509FF
SCNpilot_cont_750_bf_scaffold_1069_13
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12787..14502
DNA (1716bp) protein (572aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
proS; prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] rbh
Proline--tRNA ligase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AE79_9MICO rbh
SCNpilot_cont_750_bf_scaffold_1069_14
unknown

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14576..15640
DNA (1065bp) protein (355aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_1069_15
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(15666..16466)
DNA (801bp) protein (267aa)
Conserved membrane protein n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B704_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL41284.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1069_16
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16536..17525
DNA (990bp) protein (330aa)
transcription elongation factor NusA n=1 Tax=Microbacterium RepID=UPI00035DED39 rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
nusA; transcription elongation factor; K02600 N utilization substance protein A rbh
SCNpilot_cont_750_bf_scaffold_1069_17
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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17879..20665
DNA (2787bp) protein (929aa)
translation initiation factor IF-2 n=1 Tax=Microbacterium sp. 292MF RepID=UPI000381F5FB rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
infB; translation initiation factor 2 (IF-2; GTPase); K02519 translation initiation factor IF-2 rbh
SCNpilot_cont_750_bf_scaffold_1069_18
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20773..21210
DNA (438bp) protein (146aa)
Ribosome-binding factor A n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E257_9MICO
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A
SCNpilot_cont_750_bf_scaffold_1069_19
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21217..21948)
DNA (732bp) protein (244aa)
antibiotic ABC transporter permease n=1 Tax=Glaciibacter superstes RepID=UPI0003B6AF95
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ABC-2 type transporter family protein
SCNpilot_cont_750_bf_scaffold_1069_20
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21945..22664)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003741C03
Putative ABC transporter ATP-binding protein YbhF {ECO:0000313|EMBL:KJL41374.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ABC transporter family protein
SCNpilot_cont_750_bf_scaffold_1069_21
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22735..23604)
DNA (870bp) protein (290aa)
A/G-specific adenine glycosylase {ECO:0000313|EMBL:KJL41375.1}; EC=3.2.2.- {ECO:0000313|EMBL:KJL41375.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
nth; A/G-specific DNA glycosylase; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] rbh
adenine glycosylase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037C1BA2 rbh
SCNpilot_cont_750_bf_scaffold_1069_22
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23666..24352
DNA (687bp) protein (229aa)
phosphoribulokinase / uridine kinase family; K00876 uridine kinase [EC:2.7.1.48]
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000313AC87
Uridine kinase {ECO:0000313|EMBL:KJL41376.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_750_bf_scaffold_1069_23
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24352..25263
DNA (912bp) protein (304aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
pseudouridine synthase; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] rbh
tRNA pseudouridine synthase B n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AFD9_9MICO rbh
SCNpilot_cont_750_bf_scaffold_1069_24
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25260..25628
DNA (369bp) protein (123aa)
membrane protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036B5EF5
Uncharacterized protein {ECO:0000313|EMBL:KJL41378.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
glycogen synthase
SCNpilot_cont_750_bf_scaffold_1069_25
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25676..26119
DNA (444bp) protein (148aa)
DNA uptake lipoprotein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NA94_MICTS
Uncharacterized protein {ECO:0000313|EMBL:KJL41379.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
DNA uptake lipoprotein
SCNpilot_cont_750_bf_scaffold_1069_26
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26119..27060
DNA (942bp) protein (314aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
FAD synthase; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
FAD synthase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NA93_MICTS
SCNpilot_cont_750_bf_scaffold_1069_27
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27068..28390)
DNA (1323bp) protein (441aa)
Permease of the major facilitator superfamily n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NA92_MICTS
Antiseptic resistance protein {ECO:0000313|EMBL:KJL41381.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
permease of the major facilitator superfamily
SCNpilot_cont_750_bf_scaffold_1069_28
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28507..28701
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL41382.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_750_bf_scaffold_1069_29
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28919..31069
DNA (2151bp) protein (717aa)
helicase n=1 Tax=Microbacterium yannicii RepID=UPI00035F6A66
RNA polymerase-associated protein RapA {ECO:0000313|EMBL:KJL41383.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
superfamily II DNA/RNA helicase, SNF2 family
SCNpilot_cont_750_bf_scaffold_1069_30
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31215..31451
DNA (237bp) protein (79aa)
pfkA; 6-phosphofructokinase; K00850 6-phosphofructokinase [EC:2.7.1.11]
6-phosphofructokinase n=2 Tax=Microbacterium RepID=H8E267_9MICO
6-phosphofructokinase {ECO:0000313|EMBL:EIC09237.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Displaying 30 items

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