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SCNpilot_cont_750_bf_scaffold_1233

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_1233_1
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..99)
DNA (99bp) protein (33aa)
6-N-hydroxylaminopurine resistance protein {ECO:0000313|EMBL:KJL34930.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_750_bf_scaffold_1233_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(111..755)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F36D08
Uncharacterized protein {ECO:0000313|EMBL:KJL34929.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1233_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(700..1764)
DNA (1065bp) protein (355aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ispH; penicillin tolerance protein; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] rbh
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7M9_9MICO rbh
SCNpilot_cont_750_bf_scaffold_1233_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1811..3109
DNA (1299bp) protein (433aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
exonuclease VII, large subunit; K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
exodeoxyribonuclease VII large subunit n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037B56C2
SCNpilot_cont_750_bf_scaffold_1233_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3120..3353
DNA (234bp) protein (78aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
xseB; exonuclease VII small subunit; K03602 exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000301FCA7
SCNpilot_cont_750_bf_scaffold_1233_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3353..3985
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D64D8
Uncharacterized protein {ECO:0000313|EMBL:KJL34925.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
amino acid transporters
SCNpilot_cont_750_bf_scaffold_1233_7
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4498..5892
DNA (1395bp) protein (465aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
fumC; fumarase; K01679 fumarate hydratase, class II [EC:4.2.1.2]
Fumarate hydratase class II n=2 Tax=Microbacterium RepID=H8E7M4_9MICO
SCNpilot_cont_750_bf_scaffold_1233_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5995..7419
DNA (1425bp) protein (475aa)
Signal transduction histidine-protein kinase BaeS {ECO:0000313|EMBL:KJL34922.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJL34922.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000367A1A0
signal transduction histidine kinase
SCNpilot_cont_750_bf_scaffold_1233_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7416..8075
DNA (660bp) protein (220aa)
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBB8_MICTS rbh
Transcriptional activator protein CopR {ECO:0000313|EMBL:KJL34921.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain rbh
SCNpilot_cont_750_bf_scaffold_1233_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8208..8429
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL34995.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_750_bf_scaffold_1233_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8348..9703)
DNA (1356bp) protein (452aa)
phosphate starvation protein PhoH n=1 Tax=Microbacterium yannicii RepID=UPI0002FCFDDD
PhoH-like protein {ECO:0000313|EMBL:KJL34919.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
phoH; ATPase; K07175 PhoH-like ATPase
SCNpilot_cont_750_bf_scaffold_1233_12
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9916..10698)
DNA (783bp) protein (261aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
uppS; undecaprenyl pyrophosphate synthase; K12503 short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] rbh
UDP pyrophosphate synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000366D1A2 rbh
SCNpilot_cont_750_bf_scaffold_1233_13
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10737..11489
DNA (753bp) protein (251aa)
DNA-binding protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034876C7
Hemolysin-III related {ECO:0000313|EMBL:KJL34917.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
membrane protein, hemolysin III homolog; K11068 hemolysin III
SCNpilot_cont_750_bf_scaffold_1233_14
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11504..11767)
DNA (264bp) protein (88aa)
Arabinose efflux permease n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBB4_MICTS
Uncharacterized protein {ECO:0000313|EMBL:KJL34999.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
arabinose efflux permease
SCNpilot_cont_750_bf_scaffold_1233_15
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11838..12233
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000361441A
Uncharacterized protein {ECO:0000313|EMBL:KJL35000.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transcriptional regulator
SCNpilot_cont_750_bf_scaffold_1233_16
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12279..12791
DNA (513bp) protein (171aa)
transcription elongation factor GreA n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DCA5D
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transcription elongation factor; K03624 transcription elongation factor GreA
SCNpilot_cont_750_bf_scaffold_1233_17
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12844..14091)
DNA (1248bp) protein (416aa)
L-threonine dehydratase catabolic TdcB {ECO:0000313|EMBL:KJL34913.1}; EC=4.3.1.19 {ECO:0000313|EMBL:KJL34913.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19]
threonine dehydratase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036C57FF
SCNpilot_cont_750_bf_scaffold_1233_18
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14188..15081)
DNA (894bp) protein (298aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
integral membrane heat shock protease; K03799 heat shock protein HtpX [EC:3.4.24.-]
Protease HtpX homolog n=2 Tax=Microbacterium RepID=H8E7L2_9MICO
SCNpilot_cont_750_bf_scaffold_1233_19
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15100..15666)
DNA (567bp) protein (189aa)
LemA family protein n=2 Tax=Microbacterium RepID=H8E7L1_9MICO
LemA family protein {ECO:0000313|EMBL:KJL35004.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein; K03744 LemA protein
SCNpilot_cont_750_bf_scaffold_1233_20
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15748..17061)
DNA (1314bp) protein (438aa)
L-gulono-1,4-lactone dehydrogenase {ECO:0000313|EMBL:KJL35005.1}; EC=1.1.2.- {ECO:0000313|EMBL:KJL35005.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FAB6CC
FAD-linked oxidoreductase
SCNpilot_cont_750_bf_scaffold_1233_21
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17058..18137)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000369A95F rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL35006.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_1233_22
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18258..18677
DNA (420bp) protein (140aa)
sodium:proton antiporter n=1 Tax=Agromyces italicus RepID=UPI0003B617BF
Uncharacterized protein {ECO:0000313|EMBL:KJL35007.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
Displaying 22 items

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