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SCNpilot_cont_750_bf_scaffold_360

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_360_1
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..1536
DNA (1536bp) protein (512aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
1,4-alpha-glucan branching enzyme; K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDI4_MICTS
SCNpilot_cont_750_bf_scaffold_360_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1571..2506)
DNA (936bp) protein (312aa)
thioredoxin n=1 Tax=Microbacterium sp. B19 RepID=UPI00034934FD rbh
Thioredoxin-1 {ECO:0000313|EMBL:KJL35291.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
thioredoxin domain-containing protein; K05838 putative thioredoxin rbh
SCNpilot_cont_750_bf_scaffold_360_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2503..4335)
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D44DEE
Uncharacterized protein {ECO:0000313|EMBL:KJL35292.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
glycosyltransferase
SCNpilot_cont_750_bf_scaffold_360_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4499..5557
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K3F7_9MICO rbh
AI-2 transport protein TqsA {ECO:0000313|EMBL:KJL35293.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
permease rbh
SCNpilot_cont_750_bf_scaffold_360_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5568..6293)
DNA (726bp) protein (242aa)
alpha/beta hydrolase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A3C14
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:KJL35294.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hydrolase of the alpha/beta superfamily; K07018
SCNpilot_cont_750_bf_scaffold_360_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6581..7147)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003823117
Uncharacterized protein {ECO:0000313|EMBL:KJL35295.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
secreted protein
SCNpilot_cont_750_bf_scaffold_360_7
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7381..7986)
DNA (606bp) protein (202aa)
DivIVA domain repeat protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ALM7_9MICO
DivIVA protein {ECO:0000313|EMBL:KJL35296.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
permease of the major facilitator superfamily
SCNpilot_cont_750_bf_scaffold_360_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7983..8981)
DNA (999bp) protein (333aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
CDP-diglyceride synthetase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] rbh
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037F1EE0 rbh
SCNpilot_cont_750_bf_scaffold_360_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8990..9544)
DNA (555bp) protein (185aa)
ribosome recycling factor n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036CB652
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
frr; ribosome recycling factor; K02838 ribosome recycling factor
SCNpilot_cont_750_bf_scaffold_360_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9619..10335)
DNA (717bp) protein (239aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22]
Uridylate kinase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4G9_9MICO
SCNpilot_cont_750_bf_scaffold_360_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10438..11265)
DNA (828bp) protein (276aa)
Elongation factor Ts n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDH3_MICTS rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
tsf; translation elongation factor Ts; K02357 elongation factor Ts rbh
SCNpilot_cont_750_bf_scaffold_360_12
RBG_19FT_COMBO_Bacteroidetes_42_10_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11453..12262
DNA (810bp) protein (270aa)
Tax=RBG_19FT_COMBO_Bacteroidetes_42_10_curated
SCNpilot_cont_750_bf_scaffold_360_13
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12395..12916
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A328_9MICO
Murein hydrolase activator NlpD {ECO:0000313|EMBL:KJL35302.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
putative secreted metallopeptidase, family M23B
SCNpilot_cont_750_bf_scaffold_360_14
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12965..13915)
DNA (951bp) protein (317aa)
Tyrosine recombinase XerC n=1 Tax=Microbacterium sp. TS-1 RepID=U2XJ52_9MICO
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
integrase; K03733 integrase/recombinase XerC
SCNpilot_cont_750_bf_scaffold_360_15
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13974..14489)
DNA (516bp) protein (172aa)
DNA polymerase III n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B6D3D2
Uncharacterized protein {ECO:0000313|EMBL:KJL35304.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Rossmann fold nucleotide-binding protein; K04096 DNA processing protein
SCNpilot_cont_750_bf_scaffold_360_16
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14501..15070)
DNA (570bp) protein (190aa)
DNA protecting protein DprA n=2 Tax=Microbacterium RepID=H8E4G4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL35312.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SMF family protein; K04096 DNA processing protein
SCNpilot_cont_750_bf_scaffold_360_17
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15067..15414)
DNA (348bp) protein (116aa)
Mg chelatase, subunit ChlI n=2 Tax=Microbacterium RepID=H8E4G3_9MICO
Competence protein ComM {ECO:0000313|EMBL:KJL35313.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ATPase with chaperone activity; K07391 magnesium chelatase family protein
SCNpilot_cont_750_bf_scaffold_360_18
Rhodococcus sp. AW25M09, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15650..17116
DNA (1467bp) protein (489aa)
Phage integrase family domain-containing protein n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DNS1_9NOCA rbh
Phage integrase family domain-containing protein {ECO:0000313|EMBL:CCQ18289.1}; TaxID=1268303 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AW25M09.;"
integrase domain-containing protein rbh
SCNpilot_cont_750_bf_scaffold_360_19
Rhodococcus sp. AW25M09, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17113..18879
DNA (1767bp) protein (589aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DUT7_9NOCA rbh
Uncharacterized protein {ECO:0000313|EMBL:CCQ18290.1}; TaxID=1268303 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AW25M09.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_360_20
Rhodococcus sp. AW25M09, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18876..20957
DNA (2082bp) protein (694aa)
hypothetical protein n=1 Tax=Rhodococcus sp. DK17 RepID=UPI00037F19C6 rbh
Phage integrase family domain-containing protein {ECO:0000313|EMBL:CCQ18291.1}; TaxID=1268303 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AW25M09.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_360_21
unknown

Not on your lists

20954..21340
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI000368C7C4
SCNpilot_cont_750_bf_scaffold_360_22
unknown

Not on your lists

comp(21380..21976)
DNA (597bp) protein (199aa)

This feature has no annotations

SCNpilot_cont_750_bf_scaffold_360_23
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22558..23499)
DNA (942bp) protein (314aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
2-dehydropantoate 2-reductase n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LJX7_9ACTO rbh
apbA; putative 2-dehydropantoate 2-reductase ApbA rbh
SCNpilot_cont_750_bf_scaffold_360_24
Beauveria bassiana, Beauveria, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

comp(23517..24935)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. Ag1 RepID=J1GDH2_9ENTR rbh
Multidrug resistance protein stp {ECO:0000313|EMBL:KGQ13627.1}; TaxID=1245745 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Cordycipitaceae; Beauveria.;" source="Beauveria bassiana D1-5.;"
hypothetical protein rbh
SCNpilot_cont_750_bf_scaffold_360_25
Corynebacterium casei, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24989..25468
DNA (480bp) protein (160aa)
transcriptional regulator, HxlR family protein n=1 Tax=Brevibacterium linens RepID=UPI000050F972
HxlR family transcriptional regulator {ECO:0000313|EMBL:AHI20896.1}; TaxID=1285583 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium casei LMG S-19264.;"
putative HxlR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_360_26
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25720..26085)
DNA (366bp) protein (122aa)
Putative transcriptional regulator n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RJF5_MYCRN
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AEV74706.1}; TaxID=710685 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
SCNpilot_cont_750_bf_scaffold_360_27
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26205..26747
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000364ED22
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:AEA28092.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_360_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26912..27397
DNA (486bp) protein (162aa)
4-oxalocrotonate tautomerase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D231_PSEUX
4-oxalocrotonate tautomerase
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:AEA28091.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_750_bf_scaffold_360_29
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27400..28830
DNA (1431bp) protein (477aa)
Succinate-semialdehyde dehydrogenase (NAD(P)(+)) {ECO:0000313|EMBL:EUC12863.1}; EC=1.2.1.16 {ECO:0000313|EMBL:EUC12863.1};; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
NAD-dependent aldehyde dehydrogenase n=1 Tax=Burkholderia sp. BT03 RepID=J3C882_9BURK
SCNpilot_cont_750_bf_scaffold_360_30
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28910..29728
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262597F rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAD58115.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
Displaying items 1-30 of 80 in total

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