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SCNpilot_cont_750_bf_scaffold_556

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_750_bf_scaffold_556_1
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..497)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B32612
Phenazine biosynthesis protein, PhzF family {ECO:0000313|EMBL:ERK69611.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
putative phenazine biosynthesis protein; K06998
SCNpilot_cont_750_bf_scaffold_556_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(569..775)
DNA (207bp) protein (69aa)
GntR domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E958_9MICO
Putative HTH-type transcriptional regulator YdfH {ECO:0000313|EMBL:KJL36912.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_750_bf_scaffold_556_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(738..1124)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000364DF6C
Putative HTH-type transcriptional regulator YdfH {ECO:0000313|EMBL:KJL36912.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
GntR family transcriptional regulator
SCNpilot_cont_750_bf_scaffold_556_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1194..2372
DNA (1179bp) protein (393aa)
MFS transporter n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B5266E rbh
Nitrate transporter {ECO:0000313|EMBL:KJL36913.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
major facilitator superfamily protein rbh
SCNpilot_cont_750_bf_scaffold_556_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2398..2658)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI00037D611A
Uncharacterized protein {ECO:0000313|EMBL:KJL36914.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_556_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2676..3491)
DNA (816bp) protein (272aa)
Shikimate 5-dehydrogenase-like protein {ECO:0000313|EMBL:KJL36915.1}; EC=1.1.1.- {ECO:0000313|EMBL:KJL36915.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
shikimate dehydrogenase substrate-binding domain-containing protein; K00014 shikimate dehydrogenase [EC:1.1.1.25] rbh
Putative shikimate dehydrogenase n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6VU96_9ACTO rbh
SCNpilot_cont_750_bf_scaffold_556_7
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3531..4331
DNA (801bp) protein (267aa)
Putative glycosyltransferase EpsH {ECO:0000313|EMBL:KJL36916.1}; EC=2.4.-.- {ECO:0000313|EMBL:KJL36916.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00035CC4C4 rbh
rhamnosyltransferase
SCNpilot_cont_750_bf_scaffold_556_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4341..4637
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJD6_NAKMY
Uncharacterized protein {ECO:0000313|EMBL:KJL36917.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_556_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4711..6372
DNA (1662bp) protein (554aa)
Endoglucanase {ECO:0000256|RuleBase:RU361153}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361153};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
endoglucanase; K01179 endoglucanase [EC:3.2.1.4] rbh
Glycoside hydrolase family 5 n=2 Tax=Microbacterium RepID=H8E249_9MICO rbh
SCNpilot_cont_750_bf_scaffold_556_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6406..7449
DNA (1044bp) protein (348aa)
Predicted membrane protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N878_MICTS
Ribonuclease BN-like family protein {ECO:0000313|EMBL:KJL36919.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein; K07058 membrane protein
SCNpilot_cont_750_bf_scaffold_556_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7459..7683
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036E7E23
Uncharacterized protein {ECO:0000313|EMBL:KJL36920.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
SCNpilot_cont_750_bf_scaffold_556_12
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7680..8291
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Microbacterium RepID=UPI000364C426
CYTH domain protein {ECO:0000313|EMBL:KJL36921.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_556_13
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8354..9754)
DNA (1401bp) protein (467aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
dihydrolipoyl dehydrogenase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A3909 rbh
SCNpilot_cont_750_bf_scaffold_556_14
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9925..10416
DNA (492bp) protein (164aa)
transcriptional regulator n=1 Tax=Microbacterium yannicii RepID=UPI0002D5A179
Glycogen accumulation regulator GarA {ECO:0000313|EMBL:KJL36923.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
FHA domain
SCNpilot_cont_750_bf_scaffold_556_15
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10416..11105
DNA (690bp) protein (230aa)
MerR family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI000377DEF9
MerR family regulatory protein {ECO:0000313|EMBL:KJL36924.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transcriptional regulator
SCNpilot_cont_750_bf_scaffold_556_16
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11203..11745
DNA (543bp) protein (181aa)
Regulatory protein MerR n=2 Tax=Microbacterium RepID=H8E2J5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL36925.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transcriptional regulator
SCNpilot_cont_750_bf_scaffold_556_17
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11853..12662)
DNA (810bp) protein (270aa)
Putative ATPase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XJT1_9MICO
Chromosome partitioning protein ParA {ECO:0000313|EMBL:KJL36926.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
parA; ATPase
SCNpilot_cont_750_bf_scaffold_556_18
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12755..16162
DNA (3408bp) protein (1136aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
pycA; pyruvate carboxylase; K01958 pyruvate carboxylase [EC:6.4.1.1]
pyruvate carboxylase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00038028A2
SCNpilot_cont_750_bf_scaffold_556_19
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16213..17673
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036B38E5
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:KJL36928.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ATPase
SCNpilot_cont_750_bf_scaffold_556_20
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17677..18168
DNA (492bp) protein (164aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
N-formylmethionyl-tRNA deformylase; K01462 peptide deformylase [EC:3.5.1.88]
peptide deformylase n=1 Tax=Microbacterium yannicii RepID=UPI0002E2BF84
SCNpilot_cont_750_bf_scaffold_556_21
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18220..20067)
DNA (1848bp) protein (616aa)
Long-chain-fatty-acid--CoA ligase FadD15 {ECO:0000313|EMBL:KJL36930.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KJL36930.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
fadD; long-chain acyl-CoA synthetase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
long-chain fatty acid--CoA ligase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000374D05B
SCNpilot_cont_750_bf_scaffold_556_22
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20230..20937
DNA (708bp) protein (236aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:KJL36931.1}; EC=2.3.1.- {ECO:0000313|EMBL:KJL36931.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
Phospholipid/glycerol acyltransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E2K2_9MICO
SCNpilot_cont_750_bf_scaffold_556_23
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20942..22279
DNA (1338bp) protein (446aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:KJL36932.1}; EC=2.5.1.54 {ECO:0000313|EMBL:KJL36932.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
aroH; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035DFB9E
SCNpilot_cont_750_bf_scaffold_556_24
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22354..24300)
DNA (1947bp) protein (649aa)
Serine/threonine-protein kinase PK-1 {ECO:0000313|EMBL:KJL36933.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KJL36933.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] rbh
Serine/threonine protein kinase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N860_MICTS rbh
SCNpilot_cont_750_bf_scaffold_556_25
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24371..25351)
DNA (981bp) protein (327aa)
Muramidase-2 {ECO:0000313|EMBL:KJL36934.1}; EC=3.2.1.17 {ECO:0000313|EMBL:KJL36934.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
peptidoglycan-binding protein LysM n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CB1BB rbh
LysM repeat
SCNpilot_cont_750_bf_scaffold_556_26
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25591..25878
DNA (288bp) protein (96aa)
transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CF37A
DNA-binding protein {ECO:0000313|EMBL:KJL36935.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_556_27
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25907..26989)
DNA (1083bp) protein (361aa)
Hexaprenyl-diphosphate synthase large subunit ((2E,6E)-farnesyl-diphosphate specific) {ECO:0000313|EMBL:KJL36936.1}; EC=2.5.1.83 {ECO:0000313|EMBL:KJL36936.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
geranylgeranyl pyrophosphate synthase; K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B4S7_9MICO
SCNpilot_cont_750_bf_scaffold_556_28
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27055..27420
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KQ47_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL36937.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_750_bf_scaffold_556_29
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27625..28056
DNA (432bp) protein (144aa)
cell division protein MraZ n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B34D7
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein; K03925 MraZ protein
SCNpilot_cont_750_bf_scaffold_556_30
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28156..29109
DNA (954bp) protein (318aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
mraW; S-adenosylmethionine-dependent methyltransferase; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
16S rRNA methyltransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003805E6B
Displaying items 1-30 of 38 in total

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